Protein–RNA interactions for Protein: Q6PFF0

Scaf4, SR-related CTD-associated factor 4, mousemouse

Known RBP Predictions only

Length 1,209 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf4Q6PFF0 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC13.51□□□□□ -0.25
Scaf4Q6PFF0 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Scaf4Q6PFF0 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Scaf4Q6PFF0 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Scaf4Q6PFF0 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Scaf4Q6PFF0 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC13.51□□□□□ -0.25
Scaf4Q6PFF0 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Scaf4Q6PFF0 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Scaf4Q6PFF0 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC13.51□□□□□ -0.25
Scaf4Q6PFF0 Gm45612-201ENSMUST00000211320 160 ntBASIC13.51□□□□□ -0.25
Scaf4Q6PFF0 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Scaf4Q6PFF0 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Scaf4Q6PFF0 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Scaf4Q6PFF0 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Scaf4Q6PFF0 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Scaf4Q6PFF0 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Scaf4Q6PFF0 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC13.51□□□□□ -0.25
Scaf4Q6PFF0 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Scaf4Q6PFF0 Gm4782-201ENSMUST00000168705 2046 ntBASIC13.51□□□□□ -0.25
Scaf4Q6PFF0 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Scaf4Q6PFF0 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Scaf4Q6PFF0 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Scaf4Q6PFF0 Ntrk2-204ENSMUST00000224259 3049 ntBASIC13.5□□□□□ -0.25
Scaf4Q6PFF0 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Scaf4Q6PFF0 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Scaf4Q6PFF0 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Scaf4Q6PFF0 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Scaf4Q6PFF0 Myh7-201ENSMUST00000102803 6135 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Scaf4Q6PFF0 AC139350.1-201ENSMUST00000227064 1594 ntBASIC13.5□□□□□ -0.25
Scaf4Q6PFF0 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Scaf4Q6PFF0 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Scaf4Q6PFF0 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Scaf4Q6PFF0 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Scaf4Q6PFF0 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Scaf4Q6PFF0 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
Scaf4Q6PFF0 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Scaf4Q6PFF0 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC13.5□□□□□ -0.25
Scaf4Q6PFF0 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC13.5□□□□□ -0.25
Scaf4Q6PFF0 Gm13015-201ENSMUST00000118674 204 ntBASIC13.5□□□□□ -0.25
Scaf4Q6PFF0 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC13.5□□□□□ -0.25
Scaf4Q6PFF0 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Scaf4Q6PFF0 Gm18733-201ENSMUST00000173950 856 ntBASIC13.5□□□□□ -0.25
Scaf4Q6PFF0 Mir3113-201ENSMUST00000175478 76 ntBASIC13.5□□□□□ -0.25
Scaf4Q6PFF0 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Scaf4Q6PFF0 Gm8116-201ENSMUST00000182917 1201 ntBASIC13.5□□□□□ -0.25
Scaf4Q6PFF0 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Scaf4Q6PFF0 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC13.5□□□□□ -0.25
Scaf4Q6PFF0 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC13.5□□□□□ -0.25
Scaf4Q6PFF0 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Scaf4Q6PFF0 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
Scaf4Q6PFF0 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Scaf4Q6PFF0 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Scaf4Q6PFF0 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Scaf4Q6PFF0 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Scaf4Q6PFF0 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Scaf4Q6PFF0 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Scaf4Q6PFF0 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Scaf4Q6PFF0 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Scaf4Q6PFF0 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Scaf4Q6PFF0 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Scaf4Q6PFF0 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Scaf4Q6PFF0 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Scaf4Q6PFF0 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Scaf4Q6PFF0 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC13.49□□□□□ -0.25
Scaf4Q6PFF0 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Scaf4Q6PFF0 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC13.49□□□□□ -0.25
Scaf4Q6PFF0 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Scaf4Q6PFF0 Mir698-201ENSMUST00000102164 109 ntBASIC13.49□□□□□ -0.25
Scaf4Q6PFF0 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC13.49□□□□□ -0.25
Scaf4Q6PFF0 Gm17271-201ENSMUST00000165535 355 ntBASIC13.49□□□□□ -0.25
Scaf4Q6PFF0 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC13.49□□□□□ -0.25
Scaf4Q6PFF0 Gm5628-201ENSMUST00000222318 1049 ntBASIC13.49□□□□□ -0.25
Scaf4Q6PFF0 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Scaf4Q6PFF0 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Scaf4Q6PFF0 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Scaf4Q6PFF0 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Scaf4Q6PFF0 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Scaf4Q6PFF0 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Scaf4Q6PFF0 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Scaf4Q6PFF0 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC13.49□□□□□ -0.25
Scaf4Q6PFF0 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Scaf4Q6PFF0 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Scaf4Q6PFF0 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Scaf4Q6PFF0 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Scaf4Q6PFF0 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Scaf4Q6PFF0 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Scaf4Q6PFF0 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Scaf4Q6PFF0 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Scaf4Q6PFF0 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Scaf4Q6PFF0 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Scaf4Q6PFF0 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Scaf4Q6PFF0 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Scaf4Q6PFF0 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Scaf4Q6PFF0 Nrn1-204ENSMUST00000224323 1779 ntBASIC13.48□□□□□ -0.25
Scaf4Q6PFF0 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Scaf4Q6PFF0 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Scaf4Q6PFF0 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Scaf4Q6PFF0 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Scaf4Q6PFF0 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Scaf4Q6PFF0 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 61.2 ms