Protein–RNA interactions for Protein: Q64739

Col11a2, Collagen alpha-2(XI) chain, mousemouse

Predictions only

Length 1,736 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col11a2Q64739 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Col11a2Q64739 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Col11a2Q64739 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Col11a2Q64739 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Col11a2Q64739 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Col11a2Q64739 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Col11a2Q64739 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Col11a2Q64739 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Col11a2Q64739 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Col11a2Q64739 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Col11a2Q64739 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Col11a2Q64739 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Col11a2Q64739 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Col11a2Q64739 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Col11a2Q64739 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Col11a2Q64739 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Col11a2Q64739 Ndufs5-203ENSMUST00000106207 680 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Col11a2Q64739 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Col11a2Q64739 Gm16481-201ENSMUST00000119074 1227 ntBASIC16.19■□□□□ 0.18
Col11a2Q64739 Gm18734-201ENSMUST00000172937 808 ntBASIC16.19■□□□□ 0.18
Col11a2Q64739 Gm10109-202ENSMUST00000206890 1211 ntBASIC16.19■□□□□ 0.18
Col11a2Q64739 Gm8285-201ENSMUST00000208293 759 ntBASIC16.19■□□□□ 0.18
Col11a2Q64739 Gm8712-201ENSMUST00000221090 701 ntBASIC16.19■□□□□ 0.18
Col11a2Q64739 Ndufs5-201ENSMUST00000030401 525 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Col11a2Q64739 Prr15l-202ENSMUST00000062172 1242 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Col11a2Q64739 Gm10109-201ENSMUST00000072123 1078 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Col11a2Q64739 Klk1b27-201ENSMUST00000079859 889 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Col11a2Q64739 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Col11a2Q64739 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Col11a2Q64739 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Col11a2Q64739 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Col11a2Q64739 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Col11a2Q64739 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Col11a2Q64739 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Col11a2Q64739 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Col11a2Q64739 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Col11a2Q64739 Gm15326-202ENSMUST00000128198 1422 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Col11a2Q64739 CU062626.3-201ENSMUST00000225522 1411 ntBASIC16.19■□□□□ 0.18
Col11a2Q64739 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Col11a2Q64739 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Col11a2Q64739 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Col11a2Q64739 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Col11a2Q64739 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Col11a2Q64739 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Col11a2Q64739 Dynlrb1-202ENSMUST00000109682 684 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Col11a2Q64739 Gm5051-201ENSMUST00000204085 485 ntBASIC16.19■□□□□ 0.18
Col11a2Q64739 CT025694.1-201ENSMUST00000226188 934 ntBASIC16.19■□□□□ 0.18
Col11a2Q64739 Dhrs2-201ENSMUST00000022820 1268 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Col11a2Q64739 Mrpl18-201ENSMUST00000079121 1219 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Col11a2Q64739 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Col11a2Q64739 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Col11a2Q64739 Daam2-202ENSMUST00000224595 1926 ntBASIC16.18■□□□□ 0.18
Col11a2Q64739 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Col11a2Q64739 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC16.18■□□□□ 0.18
Col11a2Q64739 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Col11a2Q64739 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Col11a2Q64739 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Col11a2Q64739 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC16.18■□□□□ 0.18
Col11a2Q64739 Taf6l-202ENSMUST00000010249 848 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Col11a2Q64739 Gm11985-201ENSMUST00000122910 1007 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Col11a2Q64739 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Col11a2Q64739 Fez1-208ENSMUST00000163816 1285 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Col11a2Q64739 Gm28172-201ENSMUST00000189880 506 ntTSL 3 BASIC16.18■□□□□ 0.18
Col11a2Q64739 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC16.18■□□□□ 0.18
Col11a2Q64739 Ccdc28a-202ENSMUST00000080860 1190 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Col11a2Q64739 Gm14371-201ENSMUST00000138925 1518 ntBASIC16.18■□□□□ 0.18
Col11a2Q64739 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC16.18■□□□□ 0.18
Col11a2Q64739 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Col11a2Q64739 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Col11a2Q64739 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC16.18■□□□□ 0.18
Col11a2Q64739 Gm17767-201ENSMUST00000189410 1470 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Col11a2Q64739 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Col11a2Q64739 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Col11a2Q64739 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Col11a2Q64739 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Col11a2Q64739 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Col11a2Q64739 Cyp2d26-201ENSMUST00000006094 1645 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Col11a2Q64739 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Col11a2Q64739 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Col11a2Q64739 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Col11a2Q64739 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Col11a2Q64739 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Col11a2Q64739 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Col11a2Q64739 Fgf8-204ENSMUST00000111925 702 ntTSL 5 BASIC16.17■□□□□ 0.18
Col11a2Q64739 Gm13492-201ENSMUST00000119772 665 ntBASIC16.17■□□□□ 0.18
Col11a2Q64739 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Col11a2Q64739 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC16.17■□□□□ 0.18
Col11a2Q64739 Gm26361-201ENSMUST00000158868 186 ntBASIC16.17■□□□□ 0.18
Col11a2Q64739 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Col11a2Q64739 Gm28982-201ENSMUST00000186895 512 ntTSL 3 BASIC16.17■□□□□ 0.18
Col11a2Q64739 Krtap19-1-201ENSMUST00000081334 493 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
Col11a2Q64739 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Col11a2Q64739 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC16.17■□□□□ 0.18
Col11a2Q64739 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC16.17■□□□□ 0.18
Col11a2Q64739 Gm43908-201ENSMUST00000205074 1472 ntBASIC16.17■□□□□ 0.18
Col11a2Q64739 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Col11a2Q64739 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Col11a2Q64739 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Col11a2Q64739 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Col11a2Q64739 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC16.17■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms