Protein–RNA interactions for Protein: Q04683

Cxcr5, C-X-C chemokine receptor type 5, mousemouse

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcr5Q04683 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cxcr5Q04683 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cxcr5Q04683 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cxcr5Q04683 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cxcr5Q04683 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cxcr5Q04683 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC13.03□□□□□ -0.32
Cxcr5Q04683 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cxcr5Q04683 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Cxcr5Q04683 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Cxcr5Q04683 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cxcr5Q04683 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cxcr5Q04683 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cxcr5Q04683 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC13.03□□□□□ -0.32
Cxcr5Q04683 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC13.03□□□□□ -0.32
Cxcr5Q04683 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC13.03□□□□□ -0.32
Cxcr5Q04683 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
Cxcr5Q04683 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC13.03□□□□□ -0.32
Cxcr5Q04683 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC13.03□□□□□ -0.32
Cxcr5Q04683 Mir6990-201ENSMUST00000183724 91 ntBASIC13.03□□□□□ -0.32
Cxcr5Q04683 Gm5264-201ENSMUST00000190584 848 ntBASIC13.03□□□□□ -0.32
Cxcr5Q04683 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC13.03□□□□□ -0.32
Cxcr5Q04683 Gm43125-201ENSMUST00000201724 730 ntBASIC13.03□□□□□ -0.32
Cxcr5Q04683 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC13.03□□□□□ -0.32
Cxcr5Q04683 Gm4971-201ENSMUST00000205991 1108 ntBASIC13.03□□□□□ -0.32
Cxcr5Q04683 Gm16476-201ENSMUST00000221544 139 ntBASIC13.03□□□□□ -0.32
Cxcr5Q04683 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Cxcr5Q04683 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Cxcr5Q04683 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cxcr5Q04683 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cxcr5Q04683 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cxcr5Q04683 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Cxcr5Q04683 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cxcr5Q04683 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cxcr5Q04683 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cxcr5Q04683 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
Cxcr5Q04683 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cxcr5Q04683 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cxcr5Q04683 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cxcr5Q04683 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cxcr5Q04683 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Cxcr5Q04683 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cxcr5Q04683 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cxcr5Q04683 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cxcr5Q04683 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Cxcr5Q04683 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
Cxcr5Q04683 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Cxcr5Q04683 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.32
Cxcr5Q04683 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Cxcr5Q04683 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Cxcr5Q04683 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Cxcr5Q04683 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.32
Cxcr5Q04683 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Cxcr5Q04683 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.32
Cxcr5Q04683 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Cxcr5Q04683 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
Cxcr5Q04683 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cxcr5Q04683 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC13.02□□□□□ -0.33
Cxcr5Q04683 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Cxcr5Q04683 AC154806.6-201ENSMUST00000228192 202 ntBASIC13.02□□□□□ -0.33
Cxcr5Q04683 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cxcr5Q04683 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Cxcr5Q04683 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC13.02□□□□□ -0.33
Cxcr5Q04683 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cxcr5Q04683 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Cxcr5Q04683 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC13.02□□□□□ -0.33
Cxcr5Q04683 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cxcr5Q04683 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cxcr5Q04683 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cxcr5Q04683 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cxcr5Q04683 Ntrk2-208ENSMUST00000225583 2719 ntBASIC13.02□□□□□ -0.33
Cxcr5Q04683 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cxcr5Q04683 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cxcr5Q04683 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cxcr5Q04683 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cxcr5Q04683 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cxcr5Q04683 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cxcr5Q04683 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Cxcr5Q04683 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Cxcr5Q04683 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cxcr5Q04683 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC13.01□□□□□ -0.33
Cxcr5Q04683 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cxcr5Q04683 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC13.01□□□□□ -0.33
Cxcr5Q04683 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cxcr5Q04683 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Cxcr5Q04683 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cxcr5Q04683 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cxcr5Q04683 Gucy2e-201ENSMUST00000021259 8331 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Cxcr5Q04683 Gm37861-201ENSMUST00000193534 2869 ntBASIC13.01□□□□□ -0.33
Cxcr5Q04683 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC13.01□□□□□ -0.33
Cxcr5Q04683 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Cxcr5Q04683 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cxcr5Q04683 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Cxcr5Q04683 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Cxcr5Q04683 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC13.01□□□□□ -0.33
Cxcr5Q04683 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cxcr5Q04683 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cxcr5Q04683 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC13.01□□□□□ -0.33
Cxcr5Q04683 Gm33320-201ENSMUST00000192232 530 ntBASIC13.01□□□□□ -0.33
Cxcr5Q04683 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC13.01□□□□□ -0.33
Cxcr5Q04683 Ndufaf2-202ENSMUST00000223734 556 ntBASIC13.01□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 43 ms