Protein–RNA interactions for Protein: P97459

Npas1, Neuronal PAS domain-containing protein 1, mousemouse

Predictions only

Length 594 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npas1P97459 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Npas1P97459 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Npas1P97459 Ank3-201ENSMUST00000047061 2517 ntTSL 5 BASIC11.49□□□□□ -0.57
Npas1P97459 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC11.49□□□□□ -0.57
Npas1P97459 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Npas1P97459 Rsl1-201ENSMUST00000021997 2591 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Npas1P97459 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Npas1P97459 Clpb-211ENSMUST00000209579 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Npas1P97459 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Npas1P97459 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Npas1P97459 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Npas1P97459 Nwd2-201ENSMUST00000159584 8534 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Npas1P97459 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Npas1P97459 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC11.49□□□□□ -0.57
Npas1P97459 Gm9103-201ENSMUST00000119371 405 ntBASIC11.49□□□□□ -0.57
Npas1P97459 Gm27628-201ENSMUST00000184911 107 ntBASIC11.49□□□□□ -0.57
Npas1P97459 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC11.49□□□□□ -0.57
Npas1P97459 AC161829.1-201ENSMUST00000220298 281 ntBASIC11.49□□□□□ -0.57
Npas1P97459 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Npas1P97459 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Npas1P97459 Gm15590-201ENSMUST00000078419 552 ntBASIC11.49□□□□□ -0.57
Npas1P97459 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Npas1P97459 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC11.49□□□□□ -0.57
Npas1P97459 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Npas1P97459 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Npas1P97459 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Npas1P97459 Gm44086-201ENSMUST00000203251 2349 ntBASIC11.49□□□□□ -0.57
Npas1P97459 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Npas1P97459 Gm15889-202ENSMUST00000212669 2443 ntBASIC11.49□□□□□ -0.57
Npas1P97459 Wwtr1-201ENSMUST00000029380 4697 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Npas1P97459 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Npas1P97459 Fbxo46-201ENSMUST00000053109 4873 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Npas1P97459 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Npas1P97459 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Npas1P97459 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC11.49□□□□□ -0.57
Npas1P97459 Eps15l1-201ENSMUST00000163643 3129 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Npas1P97459 Sorcs1-205ENSMUST00000209413 4398 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Npas1P97459 Gm26857-201ENSMUST00000181580 3347 ntTSL 5 BASIC11.48□□□□□ -0.57
Npas1P97459 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Npas1P97459 Gm14752-201ENSMUST00000120719 2075 ntBASIC11.48□□□□□ -0.57
Npas1P97459 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Npas1P97459 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Npas1P97459 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Npas1P97459 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Npas1P97459 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Npas1P97459 Pomgnt1-205ENSMUST00000121052 2693 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Npas1P97459 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Npas1P97459 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC11.48□□□□□ -0.57
Npas1P97459 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Npas1P97459 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Npas1P97459 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Npas1P97459 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC11.48□□□□□ -0.57
Npas1P97459 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC11.48□□□□□ -0.57
Npas1P97459 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC11.48□□□□□ -0.57
Npas1P97459 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC11.48□□□□□ -0.57
Npas1P97459 Gm45098-201ENSMUST00000207179 657 ntBASIC11.48□□□□□ -0.57
Npas1P97459 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Npas1P97459 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC11.48□□□□□ -0.57
Npas1P97459 Gm9182-201ENSMUST00000217829 639 ntBASIC11.48□□□□□ -0.57
Npas1P97459 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Npas1P97459 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
Npas1P97459 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC11.48□□□□□ -0.57
Npas1P97459 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Npas1P97459 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Npas1P97459 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC11.48□□□□□ -0.57
Npas1P97459 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Npas1P97459 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Npas1P97459 AC115735.4-201ENSMUST00000227460 1944 ntBASIC11.48□□□□□ -0.57
Npas1P97459 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC11.48□□□□□ -0.57
Npas1P97459 Gm12020-201ENSMUST00000119030 2042 ntBASIC11.48□□□□□ -0.57
Npas1P97459 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Npas1P97459 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Npas1P97459 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Npas1P97459 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Npas1P97459 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Npas1P97459 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Npas1P97459 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Npas1P97459 Hk1-205ENSMUST00000130422 2916 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Npas1P97459 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Npas1P97459 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Npas1P97459 Matn2-203ENSMUST00000226766 3252 ntBASIC11.48□□□□□ -0.57
Npas1P97459 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Npas1P97459 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Npas1P97459 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Npas1P97459 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Npas1P97459 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Npas1P97459 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC11.48□□□□□ -0.57
Npas1P97459 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Npas1P97459 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Npas1P97459 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Npas1P97459 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Npas1P97459 Nfatc2-204ENSMUST00000109184 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Npas1P97459 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC11.47□□□□□ -0.57
Npas1P97459 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Npas1P97459 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Npas1P97459 Ubxn10-201ENSMUST00000105809 2757 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Npas1P97459 1200007C13Rik-201ENSMUST00000143649 2455 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Npas1P97459 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Npas1P97459 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Npas1P97459 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC11.47□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms