Protein–RNA interactions for Protein: P97334

Nkx2-3, Homeobox protein Nkx-2.3, mousemouse

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-3P97334 Gm45692-201ENSMUST00000131138 557 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Nkx2-3P97334 Gm7809-201ENSMUST00000153199 742 ntBASIC17.09■□□□□ 0.33
Nkx2-3P97334 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC17.09■□□□□ 0.33
Nkx2-3P97334 AC154462.2-201ENSMUST00000227519 370 ntBASIC17.09■□□□□ 0.33
Nkx2-3P97334 Txn2-201ENSMUST00000005487 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Nkx2-3P97334 Gm6169-201ENSMUST00000071118 1030 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Nkx2-3P97334 Trpt1-201ENSMUST00000088223 1142 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Nkx2-3P97334 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Nkx2-3P97334 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Nkx2-3P97334 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC17.09■□□□□ 0.33
Nkx2-3P97334 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Nkx2-3P97334 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Nkx2-3P97334 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Nkx2-3P97334 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Nkx2-3P97334 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Nkx2-3P97334 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Nkx2-3P97334 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Nkx2-3P97334 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Nkx2-3P97334 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC17.08■□□□□ 0.33
Nkx2-3P97334 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Nkx2-3P97334 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Nkx2-3P97334 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Nkx2-3P97334 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
Nkx2-3P97334 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Nkx2-3P97334 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC17.08■□□□□ 0.32
Nkx2-3P97334 Gm27243-201ENSMUST00000183964 521 ntBASIC17.08■□□□□ 0.32
Nkx2-3P97334 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC17.08■□□□□ 0.32
Nkx2-3P97334 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.32
Nkx2-3P97334 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Nkx2-3P97334 AC131777.1-201ENSMUST00000214749 387 ntTSL 3 BASIC17.08■□□□□ 0.32
Nkx2-3P97334 AC022775.2-201ENSMUST00000227885 646 ntBASIC17.08■□□□□ 0.32
Nkx2-3P97334 Eaf2-201ENSMUST00000023537 849 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
Nkx2-3P97334 Ndufb3-201ENSMUST00000027193 763 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Nkx2-3P97334 Fgl1-201ENSMUST00000034003 1120 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Nkx2-3P97334 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Nkx2-3P97334 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Nkx2-3P97334 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Nkx2-3P97334 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Nkx2-3P97334 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Nkx2-3P97334 Gm28182-201ENSMUST00000188354 2477 ntBASIC17.08■□□□□ 0.32
Nkx2-3P97334 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
Nkx2-3P97334 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Nkx2-3P97334 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Nkx2-3P97334 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Nkx2-3P97334 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Nkx2-3P97334 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Nkx2-3P97334 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Nkx2-3P97334 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Nkx2-3P97334 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Nkx2-3P97334 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Nkx2-3P97334 Erich1-201ENSMUST00000110813 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Nkx2-3P97334 Gemin2-201ENSMUST00000021379 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Nkx2-3P97334 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Nkx2-3P97334 Olfr763-201ENSMUST00000077460 2523 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Nkx2-3P97334 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Nkx2-3P97334 Gm3756-201ENSMUST00000169182 1355 ntBASIC17.07■□□□□ 0.32
Nkx2-3P97334 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Nkx2-3P97334 Gm13342-201ENSMUST00000121055 207 ntBASIC17.07■□□□□ 0.32
Nkx2-3P97334 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Nkx2-3P97334 Zdhhc4-208ENSMUST00000161915 1216 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Nkx2-3P97334 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC17.07■□□□□ 0.32
Nkx2-3P97334 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC17.07■□□□□ 0.32
Nkx2-3P97334 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Nkx2-3P97334 Gm4857-201ENSMUST00000192718 785 ntBASIC17.07■□□□□ 0.32
Nkx2-3P97334 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Nkx2-3P97334 Gm18935-201ENSMUST00000212692 664 ntBASIC17.07■□□□□ 0.32
Nkx2-3P97334 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Nkx2-3P97334 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Nkx2-3P97334 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Nkx2-3P97334 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Nkx2-3P97334 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
Nkx2-3P97334 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Nkx2-3P97334 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Nkx2-3P97334 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Nkx2-3P97334 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Nkx2-3P97334 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Nkx2-3P97334 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Nkx2-3P97334 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Nkx2-3P97334 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Nkx2-3P97334 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Nkx2-3P97334 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Nkx2-3P97334 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Nkx2-3P97334 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Nkx2-3P97334 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Nkx2-3P97334 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Nkx2-3P97334 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC17.06■□□□□ 0.32
Nkx2-3P97334 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Nkx2-3P97334 Cisd3-201ENSMUST00000107583 737 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Nkx2-3P97334 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC17.06■□□□□ 0.32
Nkx2-3P97334 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC17.06■□□□□ 0.32
Nkx2-3P97334 AC122305.4-201ENSMUST00000216159 1206 ntBASIC17.06■□□□□ 0.32
Nkx2-3P97334 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Nkx2-3P97334 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Nkx2-3P97334 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Nkx2-3P97334 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Nkx2-3P97334 n-R5s195-201ENSMUST00000082891 119 ntBASIC17.06■□□□□ 0.32
Nkx2-3P97334 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC17.06■□□□□ 0.32
Nkx2-3P97334 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Nkx2-3P97334 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Nkx2-3P97334 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 18.3 ms