Protein–RNA interactions for Protein: P97313

Prkdc, DNA-dependent protein kinase catalytic subunit, mousemouse

Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrkdcP97313 Gm29083-201ENSMUST00000189205 733 ntTSL 3 BASIC9.07□□□□□ -0.96
PrkdcP97313 Gtf3c6-201ENSMUST00000019982 887 ntAPPRIS ALT2 TSL 1 (best) BASIC9.07□□□□□ -0.96
PrkdcP97313 Calml4-207ENSMUST00000215968 526 ntTSL 2 BASIC9.07□□□□□ -0.96
PrkdcP97313 Cbx1-202ENSMUST00000079702 912 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
PrkdcP97313 Rpl17-201ENSMUST00000079716 775 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
PrkdcP97313 Pisd-ps2-201ENSMUST00000127960 1424 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
PrkdcP97313 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC9.07□□□□□ -0.96
PrkdcP97313 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC9.07□□□□□ -0.96
PrkdcP97313 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
PrkdcP97313 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC9.07□□□□□ -0.96
PrkdcP97313 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
PrkdcP97313 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
PrkdcP97313 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
PrkdcP97313 AC159376.1-201ENSMUST00000218504 630 ntBASIC9.07□□□□□ -0.96
PrkdcP97313 Art3-201ENSMUST00000113083 1561 ntAPPRIS P3 TSL 5 BASIC9.07□□□□□ -0.96
PrkdcP97313 Adgrv1-206ENSMUST00000128120 1591 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
PrkdcP97313 AC122197.2-201ENSMUST00000219196 1635 ntBASIC9.07□□□□□ -0.96
PrkdcP97313 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC9.07□□□□□ -0.96
PrkdcP97313 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC9.06□□□□□ -0.96
PrkdcP97313 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC9.06□□□□□ -0.96
PrkdcP97313 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
PrkdcP97313 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
PrkdcP97313 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC9.06□□□□□ -0.96
PrkdcP97313 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC9.06□□□□□ -0.96
PrkdcP97313 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC9.06□□□□□ -0.96
PrkdcP97313 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
PrkdcP97313 Gm3765-201ENSMUST00000130985 1447 ntBASIC9.06□□□□□ -0.96
PrkdcP97313 Irx3os-203ENSMUST00000133528 1354 ntTSL 5 BASIC9.06□□□□□ -0.96
PrkdcP97313 Gstm4-202ENSMUST00000106670 777 ntTSL 3 BASIC9.06□□□□□ -0.96
PrkdcP97313 Gm12130-201ENSMUST00000133599 639 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
PrkdcP97313 Mir8115-201ENSMUST00000184992 119 ntBASIC9.06□□□□□ -0.96
PrkdcP97313 Gm34023-201ENSMUST00000195539 217 ntBASIC9.06□□□□□ -0.96
PrkdcP97313 Rassf5-205ENSMUST00000212202 958 ntTSL 5 BASIC9.06□□□□□ -0.96
PrkdcP97313 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
PrkdcP97313 1700029I15Rik-201ENSMUST00000054316 364 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
PrkdcP97313 Gm10312-201ENSMUST00000078515 489 ntBASIC9.06□□□□□ -0.96
PrkdcP97313 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
PrkdcP97313 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC9.06□□□□□ -0.96
PrkdcP97313 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
PrkdcP97313 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
PrkdcP97313 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC9.06□□□□□ -0.96
PrkdcP97313 Jhy-201ENSMUST00000034521 3074 ntAPPRIS P1 TSL 5 BASIC9.06□□□□□ -0.96
PrkdcP97313 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC9.06□□□□□ -0.96
PrkdcP97313 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
PrkdcP97313 Adcyap1r1-204ENSMUST00000165857 1491 ntAPPRIS ALT2 TSL 5 BASIC9.06□□□□□ -0.96
PrkdcP97313 Rabggtb-202ENSMUST00000167111 1418 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
PrkdcP97313 Cfap161-201ENSMUST00000011298 1335 ntAPPRIS P2 TSL 1 (best) BASIC9.06□□□□□ -0.96
PrkdcP97313 Gm14058-201ENSMUST00000116082 735 ntBASIC9.06□□□□□ -0.96
PrkdcP97313 Gm14704-201ENSMUST00000120300 874 ntBASIC9.06□□□□□ -0.96
PrkdcP97313 Agtpbp1-219ENSMUST00000170378 653 ntTSL 3 BASIC9.06□□□□□ -0.96
PrkdcP97313 Gm4862-201ENSMUST00000170405 438 ntBASIC9.06□□□□□ -0.96
PrkdcP97313 4930430O22Rik-202ENSMUST00000202548 579 ntBASIC9.06□□□□□ -0.96
PrkdcP97313 Gm4797-201ENSMUST00000219075 1283 ntBASIC9.06□□□□□ -0.96
PrkdcP97313 Gm40578-201ENSMUST00000220837 390 ntTSL 2 BASIC9.06□□□□□ -0.96
PrkdcP97313 Tnfrsf19-203ENSMUST00000224371 1239 ntAPPRIS ALT2 BASIC9.06□□□□□ -0.96
PrkdcP97313 Lcn8-201ENSMUST00000038482 651 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
PrkdcP97313 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
PrkdcP97313 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
PrkdcP97313 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
PrkdcP97313 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
PrkdcP97313 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
PrkdcP97313 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC9.06□□□□□ -0.96
PrkdcP97313 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC9.06□□□□□ -0.96
PrkdcP97313 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
PrkdcP97313 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
PrkdcP97313 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
PrkdcP97313 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC9.06□□□□□ -0.96
PrkdcP97313 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
PrkdcP97313 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC9.06□□□□□ -0.96
PrkdcP97313 Gm13609-201ENSMUST00000141023 589 ntTSL 3 BASIC9.06□□□□□ -0.96
PrkdcP97313 5430405H02Rik-202ENSMUST00000176134 1196 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
PrkdcP97313 1700020A23Rik-203ENSMUST00000189961 541 ntAPPRIS P1 TSL 5 BASIC9.06□□□□□ -0.96
PrkdcP97313 Fgf5-202ENSMUST00000200059 600 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
PrkdcP97313 Gm4482-201ENSMUST00000200876 742 ntBASIC9.06□□□□□ -0.96
PrkdcP97313 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC9.06□□□□□ -0.96
PrkdcP97313 Snora73b-201ENSMUST00000083419 205 ntBASIC9.06□□□□□ -0.96
PrkdcP97313 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC9.06□□□□□ -0.96
PrkdcP97313 Nmt2-202ENSMUST00000091504 1676 ntTSL 5 BASIC9.06□□□□□ -0.96
PrkdcP97313 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC9.06□□□□□ -0.96
PrkdcP97313 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC9.06□□□□□ -0.96
PrkdcP97313 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
PrkdcP97313 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
PrkdcP97313 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
PrkdcP97313 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC9.05□□□□□ -0.96
PrkdcP97313 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
PrkdcP97313 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC9.05□□□□□ -0.96
PrkdcP97313 Dcaf4-201ENSMUST00000021645 2008 ntAPPRIS P2 TSL 5 BASIC9.05□□□□□ -0.96
PrkdcP97313 Rwdd3-205ENSMUST00000106467 1158 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
PrkdcP97313 Zfp637-210ENSMUST00000164472 1098 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
PrkdcP97313 Gm2445-201ENSMUST00000182798 989 ntBASIC9.05□□□□□ -0.96
PrkdcP97313 Gm43050-201ENSMUST00000201062 338 ntTSL 2 BASIC9.05□□□□□ -0.96
PrkdcP97313 Calca-205ENSMUST00000205933 458 ntTSL 3 BASIC9.05□□□□□ -0.96
PrkdcP97313 AC162938.2-204ENSMUST00000216455 984 ntTSL 5 BASIC9.05□□□□□ -0.96
PrkdcP97313 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC9.05□□□□□ -0.96
PrkdcP97313 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
PrkdcP97313 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC9.05□□□□□ -0.96
PrkdcP97313 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC9.05□□□□□ -0.96
PrkdcP97313 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
PrkdcP97313 Gm45242-201ENSMUST00000210666 2129 ntBASIC9.05□□□□□ -0.96
PrkdcP97313 Capzb-201ENSMUST00000030518 1390 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Retrieved 100 of 76,532 protein–RNA pairs in 52.8 ms