Protein–RNA interactions for Protein: P86449

Trim43c, Tripartite motif-containing protein 43C, mousemouse

Predictions only

Length 446 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43cP86449 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trim43cP86449 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trim43cP86449 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trim43cP86449 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trim43cP86449 Gm28386-201ENSMUST00000189147 1849 ntBASIC14.88□□□□□ -0.03
Trim43cP86449 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trim43cP86449 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC14.88□□□□□ -0.03
Trim43cP86449 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC14.88□□□□□ -0.03
Trim43cP86449 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Trim43cP86449 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC14.88□□□□□ -0.03
Trim43cP86449 Gm26464-201ENSMUST00000157094 305 ntBASIC14.88□□□□□ -0.03
Trim43cP86449 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC14.88□□□□□ -0.03
Trim43cP86449 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Trim43cP86449 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Trim43cP86449 Gm19078-201ENSMUST00000206311 727 ntBASIC14.88□□□□□ -0.03
Trim43cP86449 Gm7730-201ENSMUST00000212486 454 ntBASIC14.88□□□□□ -0.03
Trim43cP86449 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Trim43cP86449 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trim43cP86449 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trim43cP86449 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trim43cP86449 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trim43cP86449 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trim43cP86449 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trim43cP86449 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trim43cP86449 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trim43cP86449 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Trim43cP86449 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trim43cP86449 Gm3365-201ENSMUST00000216296 1480 ntBASIC14.88□□□□□ -0.03
Trim43cP86449 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Trim43cP86449 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trim43cP86449 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC14.88□□□□□ -0.03
Trim43cP86449 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trim43cP86449 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trim43cP86449 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trim43cP86449 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Trim43cP86449 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trim43cP86449 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
Trim43cP86449 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Trim43cP86449 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trim43cP86449 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Trim43cP86449 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trim43cP86449 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trim43cP86449 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Trim43cP86449 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC14.87□□□□□ -0.03
Trim43cP86449 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trim43cP86449 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC14.87□□□□□ -0.03
Trim43cP86449 Gm27772-201ENSMUST00000184900 187 ntBASIC14.87□□□□□ -0.03
Trim43cP86449 Gm28760-201ENSMUST00000185995 736 ntBASIC14.87□□□□□ -0.03
Trim43cP86449 Gm6473-201ENSMUST00000188572 1210 ntBASIC14.87□□□□□ -0.03
Trim43cP86449 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trim43cP86449 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Trim43cP86449 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trim43cP86449 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trim43cP86449 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Trim43cP86449 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trim43cP86449 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Trim43cP86449 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Trim43cP86449 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Trim43cP86449 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trim43cP86449 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trim43cP86449 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trim43cP86449 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC14.87□□□□□ -0.03
Trim43cP86449 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trim43cP86449 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Trim43cP86449 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trim43cP86449 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC14.87□□□□□ -0.03
Trim43cP86449 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trim43cP86449 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trim43cP86449 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trim43cP86449 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Trim43cP86449 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC14.86□□□□□ -0.03
Trim43cP86449 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
Trim43cP86449 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC14.86□□□□□ -0.03
Trim43cP86449 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Trim43cP86449 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC14.86□□□□□ -0.03
Trim43cP86449 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Trim43cP86449 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Trim43cP86449 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trim43cP86449 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC14.86□□□□□ -0.03
Trim43cP86449 Gm12537-201ENSMUST00000119266 1002 ntBASIC14.86□□□□□ -0.03
Trim43cP86449 Gm12070-201ENSMUST00000119551 1002 ntBASIC14.86□□□□□ -0.03
Trim43cP86449 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC14.86□□□□□ -0.03
Trim43cP86449 Gm12671-201ENSMUST00000119978 1002 ntBASIC14.86□□□□□ -0.03
Trim43cP86449 Gm13292-201ENSMUST00000120014 1000 ntBASIC14.86□□□□□ -0.03
Trim43cP86449 Gm12403-201ENSMUST00000121384 959 ntBASIC14.86□□□□□ -0.03
Trim43cP86449 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC14.86□□□□□ -0.03
Trim43cP86449 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC14.86□□□□□ -0.03
Trim43cP86449 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Trim43cP86449 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC14.86□□□□□ -0.03
Trim43cP86449 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Trim43cP86449 Gm10359-201ENSMUST00000180167 1002 ntBASIC14.86□□□□□ -0.03
Trim43cP86449 Gm12033-201ENSMUST00000180654 1002 ntBASIC14.86□□□□□ -0.03
Trim43cP86449 Gm5559-201ENSMUST00000180755 1002 ntBASIC14.86□□□□□ -0.03
Trim43cP86449 Gm4335-201ENSMUST00000182581 1004 ntBASIC14.86□□□□□ -0.03
Trim43cP86449 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC14.86□□□□□ -0.03
Trim43cP86449 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC14.86□□□□□ -0.03
Trim43cP86449 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
Trim43cP86449 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
Trim43cP86449 Gm2423-201ENSMUST00000074863 733 ntBASIC14.86□□□□□ -0.03
Trim43cP86449 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 42.9 ms