Protein–RNA interactions for Protein: P84228

Hist1h3b, Histone H3.2, mousemouse

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hist1h3bP84228 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC12.06□□□□□ -0.48
Hist1h3bP84228 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Hist1h3bP84228 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Hist1h3bP84228 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Hist1h3bP84228 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Hist1h3bP84228 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Hist1h3bP84228 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Hist1h3bP84228 Nwd2-201ENSMUST00000159584 8534 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Hist1h3bP84228 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Hist1h3bP84228 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Hist1h3bP84228 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Hist1h3bP84228 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Hist1h3bP84228 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Hist1h3bP84228 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Hist1h3bP84228 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Hist1h3bP84228 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
Hist1h3bP84228 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Hist1h3bP84228 AC168058.1-201ENSMUST00000219521 2282 ntBASIC12.06□□□□□ -0.48
Hist1h3bP84228 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Hist1h3bP84228 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Hist1h3bP84228 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC12.05□□□□□ -0.48
Hist1h3bP84228 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Hist1h3bP84228 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Hist1h3bP84228 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Hist1h3bP84228 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC12.05□□□□□ -0.48
Hist1h3bP84228 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Hist1h3bP84228 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Hist1h3bP84228 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Hist1h3bP84228 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Hist1h3bP84228 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC12.05□□□□□ -0.48
Hist1h3bP84228 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Hist1h3bP84228 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC12.05□□□□□ -0.48
Hist1h3bP84228 Gm17837-201ENSMUST00000186435 985 ntBASIC12.05□□□□□ -0.48
Hist1h3bP84228 AC139382.1-201ENSMUST00000221402 498 ntBASIC12.05□□□□□ -0.48
Hist1h3bP84228 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC12.05□□□□□ -0.48
Hist1h3bP84228 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Hist1h3bP84228 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC12.05□□□□□ -0.48
Hist1h3bP84228 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Hist1h3bP84228 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Hist1h3bP84228 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Hist1h3bP84228 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC12.05□□□□□ -0.48
Hist1h3bP84228 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Hist1h3bP84228 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Hist1h3bP84228 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Hist1h3bP84228 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Hist1h3bP84228 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Hist1h3bP84228 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC12.05□□□□□ -0.48
Hist1h3bP84228 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC12.05□□□□□ -0.48
Hist1h3bP84228 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Hist1h3bP84228 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Hist1h3bP84228 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Hist1h3bP84228 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Hist1h3bP84228 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Hist1h3bP84228 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Hist1h3bP84228 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Hist1h3bP84228 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Hist1h3bP84228 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Hist1h3bP84228 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC12.04□□□□□ -0.48
Hist1h3bP84228 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Hist1h3bP84228 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Hist1h3bP84228 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Hist1h3bP84228 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC12.04□□□□□ -0.48
Hist1h3bP84228 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Hist1h3bP84228 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Hist1h3bP84228 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Hist1h3bP84228 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Hist1h3bP84228 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC12.04□□□□□ -0.48
Hist1h3bP84228 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Hist1h3bP84228 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Hist1h3bP84228 Gm5639-201ENSMUST00000122305 2403 ntBASIC12.04□□□□□ -0.48
Hist1h3bP84228 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Hist1h3bP84228 Gm11557-201ENSMUST00000120200 1008 ntBASIC12.04□□□□□ -0.48
Hist1h3bP84228 Gm13385-201ENSMUST00000121089 220 ntBASIC12.04□□□□□ -0.48
Hist1h3bP84228 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC12.04□□□□□ -0.48
Hist1h3bP84228 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC12.04□□□□□ -0.48
Hist1h3bP84228 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
Hist1h3bP84228 Gm8927-201ENSMUST00000181978 981 ntBASIC12.04□□□□□ -0.48
Hist1h3bP84228 Gm27306-201ENSMUST00000183970 107 ntBASIC12.04□□□□□ -0.48
Hist1h3bP84228 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC12.04□□□□□ -0.48
Hist1h3bP84228 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Hist1h3bP84228 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC12.04□□□□□ -0.48
Hist1h3bP84228 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC12.04□□□□□ -0.48
Hist1h3bP84228 Gm5425-201ENSMUST00000214125 459 ntBASIC12.04□□□□□ -0.48
Hist1h3bP84228 AC126408.1-201ENSMUST00000225184 523 ntBASIC12.04□□□□□ -0.48
Hist1h3bP84228 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Hist1h3bP84228 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Hist1h3bP84228 Gm3222-201ENSMUST00000071282 990 ntBASIC12.04□□□□□ -0.48
Hist1h3bP84228 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Hist1h3bP84228 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Hist1h3bP84228 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Hist1h3bP84228 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC12.04□□□□□ -0.48
Hist1h3bP84228 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Hist1h3bP84228 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Hist1h3bP84228 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC12.04□□□□□ -0.48
Hist1h3bP84228 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Hist1h3bP84228 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Hist1h3bP84228 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC12.04□□□□□ -0.48
Hist1h3bP84228 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Hist1h3bP84228 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Hist1h3bP84228 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 31.9 ms