Protein–RNA interactions for Protein: P82347

Sgcd, Delta-sarcoglycan, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcdP82347 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
SgcdP82347 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC12.73□□□□□ -0.37
SgcdP82347 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
SgcdP82347 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
SgcdP82347 Gm8096-201ENSMUST00000209921 1591 ntBASIC12.73□□□□□ -0.37
SgcdP82347 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
SgcdP82347 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
SgcdP82347 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
SgcdP82347 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
SgcdP82347 Cox19-201ENSMUST00000049630 2461 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
SgcdP82347 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
SgcdP82347 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC12.72□□□□□ -0.37
SgcdP82347 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
SgcdP82347 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
SgcdP82347 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
SgcdP82347 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC12.72□□□□□ -0.37
SgcdP82347 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
SgcdP82347 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
SgcdP82347 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
SgcdP82347 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
SgcdP82347 Fgf17-202ENSMUST00000227123 1336 ntBASIC12.72□□□□□ -0.37
SgcdP82347 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
SgcdP82347 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC12.72□□□□□ -0.37
SgcdP82347 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC12.72□□□□□ -0.37
SgcdP82347 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC12.72□□□□□ -0.37
SgcdP82347 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
SgcdP82347 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC12.72□□□□□ -0.37
SgcdP82347 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC12.72□□□□□ -0.37
SgcdP82347 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC12.72□□□□□ -0.37
SgcdP82347 AC147366.1-201ENSMUST00000227671 852 ntBASIC12.72□□□□□ -0.37
SgcdP82347 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
SgcdP82347 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
SgcdP82347 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
SgcdP82347 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
SgcdP82347 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
SgcdP82347 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
SgcdP82347 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
SgcdP82347 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
SgcdP82347 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
SgcdP82347 Gm45743-201ENSMUST00000212701 2795 ntBASIC12.72□□□□□ -0.37
SgcdP82347 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC12.72□□□□□ -0.37
SgcdP82347 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
SgcdP82347 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
SgcdP82347 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
SgcdP82347 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
SgcdP82347 Pde4d-205ENSMUST00000119507 2163 ntTSL 5 BASIC12.71□□□□□ -0.37
SgcdP82347 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
SgcdP82347 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
SgcdP82347 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
SgcdP82347 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
SgcdP82347 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
SgcdP82347 Gm37660-201ENSMUST00000192754 1732 ntBASIC12.71□□□□□ -0.37
SgcdP82347 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
SgcdP82347 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
SgcdP82347 Rspo2-203ENSMUST00000226810 3091 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
SgcdP82347 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
SgcdP82347 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
SgcdP82347 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
SgcdP82347 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC12.71□□□□□ -0.37
SgcdP82347 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
SgcdP82347 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
SgcdP82347 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
SgcdP82347 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
SgcdP82347 Gm13365-201ENSMUST00000121188 973 ntBASIC12.71□□□□□ -0.37
SgcdP82347 Gm6944-201ENSMUST00000182449 1006 ntBASIC12.71□□□□□ -0.37
SgcdP82347 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
SgcdP82347 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC12.71□□□□□ -0.37
SgcdP82347 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
SgcdP82347 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
SgcdP82347 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
SgcdP82347 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC12.71□□□□□ -0.37
SgcdP82347 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
SgcdP82347 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
SgcdP82347 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
SgcdP82347 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
SgcdP82347 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
SgcdP82347 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
SgcdP82347 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.38
SgcdP82347 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.38
SgcdP82347 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
SgcdP82347 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
SgcdP82347 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.38
SgcdP82347 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
SgcdP82347 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
SgcdP82347 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
SgcdP82347 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
SgcdP82347 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.38
SgcdP82347 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.38
SgcdP82347 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
SgcdP82347 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
SgcdP82347 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
SgcdP82347 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
SgcdP82347 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
SgcdP82347 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
SgcdP82347 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
SgcdP82347 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
SgcdP82347 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC12.7□□□□□ -0.38
SgcdP82347 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
SgcdP82347 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
SgcdP82347 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 32 ms