Protein–RNA interactions for Protein: P70354

Msx3, Homeobox protein MSX-3, mousemouse

Predictions only

Length 204 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msx3P70354 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC14.09□□□□□ -0.15
Msx3P70354 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Msx3P70354 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Msx3P70354 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Msx3P70354 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Msx3P70354 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Msx3P70354 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Msx3P70354 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Msx3P70354 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Msx3P70354 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Msx3P70354 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Msx3P70354 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Msx3P70354 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Msx3P70354 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC14.08□□□□□ -0.16
Msx3P70354 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Msx3P70354 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Msx3P70354 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Msx3P70354 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Msx3P70354 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC14.08□□□□□ -0.16
Msx3P70354 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Msx3P70354 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Msx3P70354 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Msx3P70354 Gm7775-201ENSMUST00000218871 853 ntBASIC14.08□□□□□ -0.16
Msx3P70354 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Msx3P70354 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC14.08□□□□□ -0.16
Msx3P70354 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC14.08□□□□□ -0.16
Msx3P70354 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Msx3P70354 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Msx3P70354 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Msx3P70354 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Msx3P70354 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Msx3P70354 Gm8775-201ENSMUST00000170943 1327 ntBASIC14.08□□□□□ -0.16
Msx3P70354 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC14.08□□□□□ -0.16
Msx3P70354 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Msx3P70354 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Msx3P70354 AC139350.1-201ENSMUST00000227064 1594 ntBASIC14.08□□□□□ -0.16
Msx3P70354 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Msx3P70354 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Msx3P70354 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Msx3P70354 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Msx3P70354 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Msx3P70354 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Msx3P70354 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Msx3P70354 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Msx3P70354 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC14.07□□□□□ -0.16
Msx3P70354 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC14.07□□□□□ -0.16
Msx3P70354 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Msx3P70354 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Msx3P70354 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Msx3P70354 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Msx3P70354 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Msx3P70354 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Msx3P70354 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Msx3P70354 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Msx3P70354 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Msx3P70354 Gm15240-201ENSMUST00000118156 720 ntBASIC14.07□□□□□ -0.16
Msx3P70354 Gm13223-201ENSMUST00000118609 747 ntBASIC14.07□□□□□ -0.16
Msx3P70354 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC14.07□□□□□ -0.16
Msx3P70354 Gm9063-201ENSMUST00000223299 582 ntBASIC14.07□□□□□ -0.16
Msx3P70354 AC126408.1-201ENSMUST00000225184 523 ntBASIC14.07□□□□□ -0.16
Msx3P70354 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Msx3P70354 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Msx3P70354 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Msx3P70354 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Msx3P70354 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Msx3P70354 Acot6-202ENSMUST00000222921 3622 ntBASIC14.07□□□□□ -0.16
Msx3P70354 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Msx3P70354 AC159621.2-201ENSMUST00000223519 1326 ntBASIC14.07□□□□□ -0.16
Msx3P70354 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Msx3P70354 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Msx3P70354 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Msx3P70354 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC14.07□□□□□ -0.16
Msx3P70354 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Msx3P70354 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Msx3P70354 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Msx3P70354 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Msx3P70354 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Msx3P70354 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Msx3P70354 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Msx3P70354 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Msx3P70354 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Msx3P70354 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC14.06□□□□□ -0.16
Msx3P70354 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Msx3P70354 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Msx3P70354 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Msx3P70354 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC14.06□□□□□ -0.16
Msx3P70354 Gm4875-201ENSMUST00000118257 786 ntBASIC14.06□□□□□ -0.16
Msx3P70354 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC14.06□□□□□ -0.16
Msx3P70354 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC14.06□□□□□ -0.16
Msx3P70354 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Msx3P70354 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Msx3P70354 Gm27772-201ENSMUST00000184900 187 ntBASIC14.06□□□□□ -0.16
Msx3P70354 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Msx3P70354 Gm18905-201ENSMUST00000205454 928 ntBASIC14.06□□□□□ -0.16
Msx3P70354 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC14.06□□□□□ -0.16
Msx3P70354 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Msx3P70354 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Msx3P70354 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Msx3P70354 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Msx3P70354 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 35.8 ms