Protein–RNA interactions for Protein: P70271

Pdlim4, PDZ and LIM domain protein 4, mousemouse

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim4P70271 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
Pdlim4P70271 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Pdlim4P70271 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Pdlim4P70271 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC11.43□□□□□ -0.58
Pdlim4P70271 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Pdlim4P70271 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Pdlim4P70271 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC11.43□□□□□ -0.58
Pdlim4P70271 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
Pdlim4P70271 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Pdlim4P70271 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Pdlim4P70271 Pja1-201ENSMUST00000036354 2563 ntAPPRIS P4 TSL 1 (best) BASIC11.43□□□□□ -0.58
Pdlim4P70271 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Pdlim4P70271 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Pdlim4P70271 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Pdlim4P70271 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Pdlim4P70271 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Pdlim4P70271 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Pdlim4P70271 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Pdlim4P70271 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Pdlim4P70271 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Pdlim4P70271 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Pdlim4P70271 Olfr607-202ENSMUST00000214347 5706 ntAPPRIS P5 TSL 5 BASIC11.42□□□□□ -0.58
Pdlim4P70271 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Pdlim4P70271 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Pdlim4P70271 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC11.42□□□□□ -0.58
Pdlim4P70271 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC11.42□□□□□ -0.58
Pdlim4P70271 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Pdlim4P70271 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Pdlim4P70271 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Pdlim4P70271 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Pdlim4P70271 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Pdlim4P70271 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
Pdlim4P70271 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Pdlim4P70271 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Pdlim4P70271 Gm15487-201ENSMUST00000122373 465 ntBASIC11.42□□□□□ -0.58
Pdlim4P70271 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC11.42□□□□□ -0.58
Pdlim4P70271 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC11.42□□□□□ -0.58
Pdlim4P70271 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Pdlim4P70271 Gm5425-201ENSMUST00000214125 459 ntBASIC11.42□□□□□ -0.58
Pdlim4P70271 AC149294.4-201ENSMUST00000227870 882 ntBASIC11.42□□□□□ -0.58
Pdlim4P70271 CT030704.2-201ENSMUST00000228887 494 ntBASIC11.42□□□□□ -0.58
Pdlim4P70271 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Pdlim4P70271 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC11.42□□□□□ -0.58
Pdlim4P70271 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC11.42□□□□□ -0.58
Pdlim4P70271 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Pdlim4P70271 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
Pdlim4P70271 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Pdlim4P70271 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Pdlim4P70271 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Pdlim4P70271 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Pdlim4P70271 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC11.42□□□□□ -0.58
Pdlim4P70271 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Pdlim4P70271 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Pdlim4P70271 Gm42748-201ENSMUST00000199354 2341 ntBASIC11.42□□□□□ -0.58
Pdlim4P70271 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Pdlim4P70271 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Pdlim4P70271 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Pdlim4P70271 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Pdlim4P70271 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Pdlim4P70271 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Pdlim4P70271 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Pdlim4P70271 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Pdlim4P70271 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Pdlim4P70271 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Pdlim4P70271 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Pdlim4P70271 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Pdlim4P70271 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Pdlim4P70271 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Pdlim4P70271 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC11.41□□□□□ -0.58
Pdlim4P70271 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Pdlim4P70271 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC11.41□□□□□ -0.58
Pdlim4P70271 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Pdlim4P70271 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Pdlim4P70271 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Pdlim4P70271 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Pdlim4P70271 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Pdlim4P70271 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC11.41□□□□□ -0.58
Pdlim4P70271 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC11.41□□□□□ -0.58
Pdlim4P70271 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC11.41□□□□□ -0.58
Pdlim4P70271 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Pdlim4P70271 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Pdlim4P70271 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Pdlim4P70271 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Pdlim4P70271 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Pdlim4P70271 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Pdlim4P70271 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC11.41□□□□□ -0.58
Pdlim4P70271 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Pdlim4P70271 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Pdlim4P70271 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Pdlim4P70271 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Pdlim4P70271 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Pdlim4P70271 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Pdlim4P70271 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Pdlim4P70271 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Pdlim4P70271 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Pdlim4P70271 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC11.4□□□□□ -0.58
Pdlim4P70271 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC11.4□□□□□ -0.58
Pdlim4P70271 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC11.4□□□□□ -0.58
Pdlim4P70271 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Pdlim4P70271 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 43 ms