Protein–RNA interactions for Protein: P61025

Cks1b, Cyclin-dependent kinases regulatory subunit 1, mousemouse

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks1bP61025 Ddx55-201ENSMUST00000071057 2799 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Cks1bP61025 Bmp3-203ENSMUST00000200388 6609 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Cks1bP61025 Thrap3-201ENSMUST00000080919 4378 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Cks1bP61025 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC9.79□□□□□ -0.84
Cks1bP61025 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Cks1bP61025 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Cks1bP61025 Asb3-202ENSMUST00000117883 2509 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Cks1bP61025 Aff3-203ENSMUST00000095027 5857 ntAPPRIS P2 TSL 5 BASIC9.79□□□□□ -0.84
Cks1bP61025 Smim1-213ENSMUST00000182151 5091 ntAPPRIS P1 TSL 2 BASIC9.79□□□□□ -0.84
Cks1bP61025 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Cks1bP61025 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Cks1bP61025 Tmem266-202ENSMUST00000085754 4417 ntAPPRIS ALT2 TSL 1 (best) BASIC9.79□□□□□ -0.84
Cks1bP61025 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Cks1bP61025 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Cks1bP61025 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC9.78□□□□□ -0.84
Cks1bP61025 Plcd4-205ENSMUST00000113749 4648 ntAPPRIS ALT2 TSL 5 BASIC9.78□□□□□ -0.84
Cks1bP61025 AC126250.1-201ENSMUST00000228343 1768 ntBASIC9.78□□□□□ -0.84
Cks1bP61025 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC9.78□□□□□ -0.84
Cks1bP61025 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Cks1bP61025 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC9.78□□□□□ -0.84
Cks1bP61025 Abca7-203ENSMUST00000171637 6638 ntAPPRIS ALT2 TSL 1 (best) BASIC9.78□□□□□ -0.84
Cks1bP61025 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Cks1bP61025 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Cks1bP61025 Kdm2b-202ENSMUST00000046073 5180 ntAPPRIS P2 TSL 1 (best) BASIC9.78□□□□□ -0.84
Cks1bP61025 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC9.78□□□□□ -0.84
Cks1bP61025 Epm2aip1-202ENSMUST00000135807 4245 ntAPPRIS P1 TSL 2 BASIC9.78□□□□□ -0.84
Cks1bP61025 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Cks1bP61025 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC9.78□□□□□ -0.84
Cks1bP61025 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC9.78□□□□□ -0.84
Cks1bP61025 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC9.78□□□□□ -0.84
Cks1bP61025 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC9.78□□□□□ -0.84
Cks1bP61025 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Cks1bP61025 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Cks1bP61025 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC9.78□□□□□ -0.84
Cks1bP61025 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC9.78□□□□□ -0.84
Cks1bP61025 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC9.78□□□□□ -0.84
Cks1bP61025 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC9.78□□□□□ -0.84
Cks1bP61025 AC154471.1-201ENSMUST00000224418 436 ntBASIC9.78□□□□□ -0.84
Cks1bP61025 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Cks1bP61025 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Cks1bP61025 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Cks1bP61025 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC9.78□□□□□ -0.84
Cks1bP61025 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC9.78□□□□□ -0.84
Cks1bP61025 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC9.78□□□□□ -0.84
Cks1bP61025 Vezf1-201ENSMUST00000018521 4583 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Cks1bP61025 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Cks1bP61025 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Cks1bP61025 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Cks1bP61025 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC9.78□□□□□ -0.84
Cks1bP61025 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC9.78□□□□□ -0.84
Cks1bP61025 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Cks1bP61025 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Cks1bP61025 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC9.78□□□□□ -0.84
Cks1bP61025 Satb1-208ENSMUST00000144331 6243 ntAPPRIS P2 TSL 1 (best) BASIC9.78□□□□□ -0.84
Cks1bP61025 Ercc2-202ENSMUST00000108460 3485 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Cks1bP61025 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Cks1bP61025 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC9.78□□□□□ -0.84
Cks1bP61025 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Cks1bP61025 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC9.78□□□□□ -0.84
Cks1bP61025 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC9.78□□□□□ -0.84
Cks1bP61025 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Cks1bP61025 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC9.78□□□□□ -0.84
Cks1bP61025 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC9.78□□□□□ -0.84
Cks1bP61025 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC9.78□□□□□ -0.84
Cks1bP61025 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC9.78□□□□□ -0.84
Cks1bP61025 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Cks1bP61025 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Cks1bP61025 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC9.78□□□□□ -0.84
Cks1bP61025 Rassf4-201ENSMUST00000035842 6460 ntAPPRIS P2 TSL 1 (best) BASIC9.77□□□□□ -0.84
Cks1bP61025 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.84
Cks1bP61025 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC9.77□□□□□ -0.84
Cks1bP61025 Maml3-201ENSMUST00000118075 5450 ntTSL 1 (best) BASIC9.77□□□□□ -0.84
Cks1bP61025 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC9.77□□□□□ -0.84
Cks1bP61025 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC9.77□□□□□ -0.84
Cks1bP61025 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC9.77□□□□□ -0.84
Cks1bP61025 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC9.77□□□□□ -0.84
Cks1bP61025 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.84
Cks1bP61025 Bcl11a-201ENSMUST00000000881 3061 ntTSL 1 (best) BASIC9.77□□□□□ -0.84
Cks1bP61025 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC9.77□□□□□ -0.84
Cks1bP61025 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC9.77□□□□□ -0.85
Cks1bP61025 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Cks1bP61025 AC149222.1-201ENSMUST00000154987 5188 ntAPPRIS P5 TSL 1 (best) BASIC9.77□□□□□ -0.85
Cks1bP61025 Gm37542-201ENSMUST00000192563 2832 ntBASIC9.77□□□□□ -0.85
Cks1bP61025 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Cks1bP61025 Pla2g6-206ENSMUST00000173163 3018 ntTSL 5 BASIC9.77□□□□□ -0.85
Cks1bP61025 Gm13418-201ENSMUST00000119097 944 ntBASIC9.77□□□□□ -0.85
Cks1bP61025 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Cks1bP61025 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC9.77□□□□□ -0.85
Cks1bP61025 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC9.77□□□□□ -0.85
Cks1bP61025 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC9.77□□□□□ -0.85
Cks1bP61025 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Cks1bP61025 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Cks1bP61025 Agpat3-205ENSMUST00000105390 3513 ntAPPRIS P1 TSL 5 BASIC9.77□□□□□ -0.85
Cks1bP61025 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Cks1bP61025 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Cks1bP61025 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Cks1bP61025 Gm37368-201ENSMUST00000193173 3212 ntBASIC9.77□□□□□ -0.85
Cks1bP61025 Gm5639-201ENSMUST00000122305 2403 ntBASIC9.77□□□□□ -0.85
Cks1bP61025 Sema4a-215ENSMUST00000169222 3084 ntAPPRIS P1 TSL 5 BASIC9.77□□□□□ -0.85
Cks1bP61025 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Retrieved 100 of 76,532 protein–RNA pairs in 32.4 ms