Protein–RNA interactions for Protein: P59240

Nphp4, Nephrocystin-4, mousemouse

Predictions only

Length 1,425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nphp4P59240 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Nphp4P59240 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Nphp4P59240 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Nphp4P59240 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Nphp4P59240 Ypel3-202ENSMUST00000106356 785 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Nphp4P59240 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Nphp4P59240 Gm11591-201ENSMUST00000120063 702 ntBASIC18.36■□□□□ 0.53
Nphp4P59240 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Nphp4P59240 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC18.36■□□□□ 0.53
Nphp4P59240 Gm8801-201ENSMUST00000173255 1064 ntBASIC18.36■□□□□ 0.53
Nphp4P59240 Krtap19-2-201ENSMUST00000076186 605 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
Nphp4P59240 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Nphp4P59240 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Nphp4P59240 Gm12626-201ENSMUST00000117339 1983 ntBASIC18.36■□□□□ 0.53
Nphp4P59240 Gm12623-201ENSMUST00000119849 1983 ntBASIC18.36■□□□□ 0.53
Nphp4P59240 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Nphp4P59240 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Nphp4P59240 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Nphp4P59240 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC18.35■□□□□ 0.53
Nphp4P59240 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC18.35■□□□□ 0.53
Nphp4P59240 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Nphp4P59240 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC18.35■□□□□ 0.53
Nphp4P59240 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC18.35■□□□□ 0.53
Nphp4P59240 Hspb9-201ENSMUST00000017976 652 ntAPPRIS ALT2 BASIC18.35■□□□□ 0.53
Nphp4P59240 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC18.35■□□□□ 0.53
Nphp4P59240 Gm31992-201ENSMUST00000213387 862 ntTSL 5 BASIC18.35■□□□□ 0.53
Nphp4P59240 Gm9803-202ENSMUST00000216543 456 ntTSL 5 BASIC18.35■□□□□ 0.53
Nphp4P59240 AC022775.2-201ENSMUST00000227885 646 ntBASIC18.35■□□□□ 0.53
Nphp4P59240 AC154276.1-201ENSMUST00000228874 1299 ntBASIC18.35■□□□□ 0.53
Nphp4P59240 Olfr1423-201ENSMUST00000087831 933 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Nphp4P59240 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Nphp4P59240 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Nphp4P59240 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Nphp4P59240 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Nphp4P59240 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Nphp4P59240 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Nphp4P59240 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC18.35■□□□□ 0.53
Nphp4P59240 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC18.34■□□□□ 0.53
Nphp4P59240 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Nphp4P59240 AC101945.2-201ENSMUST00000227886 1377 ntBASIC18.34■□□□□ 0.53
Nphp4P59240 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Nphp4P59240 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Nphp4P59240 Gm12329-201ENSMUST00000120829 1007 ntBASIC18.34■□□□□ 0.53
Nphp4P59240 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Nphp4P59240 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC18.34■□□□□ 0.53
Nphp4P59240 Gm38319-201ENSMUST00000194537 1266 ntBASIC18.34■□□□□ 0.53
Nphp4P59240 Gm38158-201ENSMUST00000194617 339 ntBASIC18.34■□□□□ 0.53
Nphp4P59240 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Nphp4P59240 AC140406.1-201ENSMUST00000226481 465 ntBASIC18.34■□□□□ 0.53
Nphp4P59240 Rwdd3-201ENSMUST00000039761 1145 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Nphp4P59240 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Nphp4P59240 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Nphp4P59240 AC159649.2-201ENSMUST00000222984 3223 ntBASIC18.34■□□□□ 0.53
Nphp4P59240 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Nphp4P59240 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
Nphp4P59240 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Nphp4P59240 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC18.34■□□□□ 0.53
Nphp4P59240 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Nphp4P59240 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Nphp4P59240 Gm9431-201ENSMUST00000119765 1051 ntBASIC18.33■□□□□ 0.53
Nphp4P59240 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC18.33■□□□□ 0.53
Nphp4P59240 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Nphp4P59240 Gm37042-201ENSMUST00000193816 581 ntBASIC18.33■□□□□ 0.53
Nphp4P59240 AC153845.2-201ENSMUST00000217535 673 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Nphp4P59240 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Nphp4P59240 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Nphp4P59240 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Nphp4P59240 Gm6203-201ENSMUST00000209575 1342 ntBASIC18.33■□□□□ 0.52
Nphp4P59240 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
Nphp4P59240 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
Nphp4P59240 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Nphp4P59240 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
Nphp4P59240 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Nphp4P59240 Allc-202ENSMUST00000110917 1384 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Nphp4P59240 Gm37912-201ENSMUST00000191895 3076 ntBASIC18.33■□□□□ 0.52
Nphp4P59240 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
Nphp4P59240 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Nphp4P59240 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Nphp4P59240 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Nphp4P59240 Zkscan3-208ENSMUST00000224820 5398 ntBASIC18.32■□□□□ 0.52
Nphp4P59240 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Nphp4P59240 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC18.32■□□□□ 0.52
Nphp4P59240 Gm8805-201ENSMUST00000117848 313 ntBASIC18.32■□□□□ 0.52
Nphp4P59240 Gm14723-201ENSMUST00000118686 215 ntBASIC18.32■□□□□ 0.52
Nphp4P59240 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Nphp4P59240 Gm26618-201ENSMUST00000181123 497 ntTSL 2 BASIC18.32■□□□□ 0.52
Nphp4P59240 Gm27501-201ENSMUST00000183599 107 ntBASIC18.32■□□□□ 0.52
Nphp4P59240 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC18.32■□□□□ 0.52
Nphp4P59240 Gm43403-202ENSMUST00000198830 370 ntTSL 3 BASIC18.32■□□□□ 0.52
Nphp4P59240 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC18.32■□□□□ 0.52
Nphp4P59240 Gm32025-201ENSMUST00000217960 307 ntBASIC18.32■□□□□ 0.52
Nphp4P59240 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC18.32■□□□□ 0.52
Nphp4P59240 Krtap4-7-201ENSMUST00000055121 984 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Nphp4P59240 Gm43056-201ENSMUST00000197865 2791 ntBASIC18.32■□□□□ 0.52
Nphp4P59240 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Nphp4P59240 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Nphp4P59240 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Nphp4P59240 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Nphp4P59240 AC154725.1-201ENSMUST00000224826 1961 ntBASIC18.32■□□□□ 0.52
Nphp4P59240 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 52 ms