Protein–RNA interactions for Protein: P55066

Ncan, Neurocan core protein, mousemouse

Predictions only

Length 1,268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NcanP55066 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
NcanP55066 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
NcanP55066 Gm23200-201ENSMUST00000104379 132 ntBASIC14.3□□□□□ -0.12
NcanP55066 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
NcanP55066 Gm9211-201ENSMUST00000182882 975 ntBASIC14.3□□□□□ -0.12
NcanP55066 Gm28450-201ENSMUST00000187349 638 ntBASIC14.3□□□□□ -0.12
NcanP55066 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
NcanP55066 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC14.3□□□□□ -0.12
NcanP55066 AC154176.1-201ENSMUST00000225897 220 ntBASIC14.3□□□□□ -0.12
NcanP55066 Il17c-201ENSMUST00000050963 719 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
NcanP55066 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
NcanP55066 Camk2g-217ENSMUST00000226630 1937 ntBASIC14.3□□□□□ -0.12
NcanP55066 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
NcanP55066 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
NcanP55066 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
NcanP55066 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC14.3□□□□□ -0.12
NcanP55066 Gm5846-201ENSMUST00000193146 1414 ntBASIC14.3□□□□□ -0.12
NcanP55066 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
NcanP55066 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
NcanP55066 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
NcanP55066 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC14.3□□□□□ -0.12
NcanP55066 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
NcanP55066 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
NcanP55066 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
NcanP55066 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
NcanP55066 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
NcanP55066 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC14.29□□□□□ -0.12
NcanP55066 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
NcanP55066 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
NcanP55066 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
NcanP55066 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
NcanP55066 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
NcanP55066 0610010K14Rik-203ENSMUST00000100950 545 ntTSL 2 BASIC14.29□□□□□ -0.12
NcanP55066 Prox1os-201ENSMUST00000110279 828 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
NcanP55066 Gm13611-201ENSMUST00000118269 318 ntBASIC14.29□□□□□ -0.12
NcanP55066 Gm6447-201ENSMUST00000118905 835 ntBASIC14.29□□□□□ -0.12
NcanP55066 Gm4760-201ENSMUST00000119663 1030 ntBASIC14.29□□□□□ -0.12
NcanP55066 Gm26185-201ENSMUST00000157692 266 ntBASIC14.29□□□□□ -0.12
NcanP55066 Gm26956-201ENSMUST00000182176 986 ntBASIC14.29□□□□□ -0.12
NcanP55066 Pfn1-201ENSMUST00000018437 861 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
NcanP55066 Gm29155-201ENSMUST00000185910 269 ntBASIC14.29□□□□□ -0.12
NcanP55066 Gm42838-201ENSMUST00000196503 439 ntTSL 5 BASIC14.29□□□□□ -0.12
NcanP55066 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
NcanP55066 Mrpl23-206ENSMUST00000210662 736 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
NcanP55066 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC14.29□□□□□ -0.12
NcanP55066 Gm4950-201ENSMUST00000091905 618 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
NcanP55066 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
NcanP55066 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC14.29□□□□□ -0.12
NcanP55066 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
NcanP55066 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
NcanP55066 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
NcanP55066 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
NcanP55066 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
NcanP55066 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
NcanP55066 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
NcanP55066 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
NcanP55066 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC14.28□□□□□ -0.12
NcanP55066 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
NcanP55066 Gm25214-201ENSMUST00000104573 129 ntBASIC14.28□□□□□ -0.12
NcanP55066 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC14.28□□□□□ -0.12
NcanP55066 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
NcanP55066 Gm11531-201ENSMUST00000117614 555 ntBASIC14.28□□□□□ -0.12
NcanP55066 Rgs17-203ENSMUST00000117676 1651 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
NcanP55066 Gm12816-201ENSMUST00000118069 1212 ntBASIC14.28□□□□□ -0.12
NcanP55066 Gm11637-201ENSMUST00000120601 592 ntBASIC14.28□□□□□ -0.12
NcanP55066 4930583K01Rik-201ENSMUST00000138180 925 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
NcanP55066 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
NcanP55066 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
NcanP55066 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
NcanP55066 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
NcanP55066 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
NcanP55066 Banp-210ENSMUST00000173254 1521 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
NcanP55066 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC14.28□□□□□ -0.12
NcanP55066 Adtrp-204ENSMUST00000179758 1046 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
NcanP55066 Smim22-207ENSMUST00000184439 382 ntAPPRIS P3 TSL 2 BASIC14.28□□□□□ -0.12
NcanP55066 Rgs6-207ENSMUST00000186323 1308 ntTSL 5 BASIC14.28□□□□□ -0.12
NcanP55066 Tubb4b-ps2-201ENSMUST00000187481 1337 ntBASIC14.28□□□□□ -0.12
NcanP55066 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
NcanP55066 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC14.28□□□□□ -0.12
NcanP55066 Gm44126-201ENSMUST00000204831 514 ntBASIC14.28□□□□□ -0.12
NcanP55066 Gm44262-201ENSMUST00000204969 372 ntBASIC14.28□□□□□ -0.12
NcanP55066 Gm4768-201ENSMUST00000206199 686 ntBASIC14.28□□□□□ -0.12
NcanP55066 Gm19963-201ENSMUST00000208413 1255 ntBASIC14.28□□□□□ -0.12
NcanP55066 Abhd14b-210ENSMUST00000217496 631 ntTSL 5 BASIC14.28□□□□□ -0.12
NcanP55066 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
NcanP55066 AC173210.1-201ENSMUST00000222341 1131 ntBASIC14.28□□□□□ -0.12
NcanP55066 Trex2-201ENSMUST00000033738 1017 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
NcanP55066 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
NcanP55066 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC14.28□□□□□ -0.12
NcanP55066 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
NcanP55066 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC14.28□□□□□ -0.12
NcanP55066 Crry-ps-201ENSMUST00000079090 1309 ntBASIC14.28□□□□□ -0.12
NcanP55066 Olfr91-201ENSMUST00000087144 939 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
NcanP55066 Olfr76-201ENSMUST00000087822 1048 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
NcanP55066 Gm5879-201ENSMUST00000089501 1209 ntBASIC14.28□□□□□ -0.12
NcanP55066 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
NcanP55066 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
NcanP55066 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC14.28□□□□□ -0.12
NcanP55066 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
NcanP55066 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 24.6 ms