Protein–RNA interactions for Protein: P54846

Nrl, Neural retina-specific leucine zipper protein, mousemouse

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NrlP54846 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
NrlP54846 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
NrlP54846 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
NrlP54846 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
NrlP54846 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC14.57□□□□□ -0.08
NrlP54846 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
NrlP54846 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
NrlP54846 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
NrlP54846 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
NrlP54846 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
NrlP54846 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
NrlP54846 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
NrlP54846 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
NrlP54846 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
NrlP54846 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
NrlP54846 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
NrlP54846 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
NrlP54846 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
NrlP54846 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
NrlP54846 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
NrlP54846 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC14.56□□□□□ -0.08
NrlP54846 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
NrlP54846 Nfu1-203ENSMUST00000120240 1195 ntAPPRIS P3 TSL 5 BASIC14.56□□□□□ -0.08
NrlP54846 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC14.56□□□□□ -0.08
NrlP54846 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC14.56□□□□□ -0.08
NrlP54846 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
NrlP54846 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
NrlP54846 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC14.56□□□□□ -0.08
NrlP54846 AC166997.1-201ENSMUST00000225122 572 ntBASIC14.56□□□□□ -0.08
NrlP54846 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
NrlP54846 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
NrlP54846 Rassf8-202ENSMUST00000058538 1131 ntBASIC14.56□□□□□ -0.08
NrlP54846 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
NrlP54846 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
NrlP54846 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
NrlP54846 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
NrlP54846 Gm13050-201ENSMUST00000122149 1345 ntBASIC14.56□□□□□ -0.08
NrlP54846 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
NrlP54846 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
NrlP54846 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
NrlP54846 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
NrlP54846 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
NrlP54846 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC14.56□□□□□ -0.08
NrlP54846 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
NrlP54846 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
NrlP54846 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
NrlP54846 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
NrlP54846 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
NrlP54846 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC14.55□□□□□ -0.08
NrlP54846 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
NrlP54846 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
NrlP54846 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
NrlP54846 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
NrlP54846 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
NrlP54846 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
NrlP54846 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
NrlP54846 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
NrlP54846 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
NrlP54846 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
NrlP54846 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC14.55□□□□□ -0.08
NrlP54846 Gm27206-201ENSMUST00000154038 979 ntTSL 5 BASIC14.55□□□□□ -0.08
NrlP54846 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
NrlP54846 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
NrlP54846 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC14.55□□□□□ -0.08
NrlP54846 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
NrlP54846 Gm8399-201ENSMUST00000082300 1117 ntBASIC14.55□□□□□ -0.08
NrlP54846 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
NrlP54846 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
NrlP54846 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
NrlP54846 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
NrlP54846 Gm28182-201ENSMUST00000188354 2477 ntBASIC14.55□□□□□ -0.08
NrlP54846 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
NrlP54846 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC14.55□□□□□ -0.08
NrlP54846 AC161252.3-201ENSMUST00000225465 1549 ntBASIC14.55□□□□□ -0.08
NrlP54846 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC14.55□□□□□ -0.08
NrlP54846 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
NrlP54846 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
NrlP54846 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC14.55□□□□□ -0.08
NrlP54846 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
NrlP54846 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
NrlP54846 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
NrlP54846 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
NrlP54846 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
NrlP54846 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
NrlP54846 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
NrlP54846 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC14.55□□□□□ -0.08
NrlP54846 AC121801.1-201ENSMUST00000225363 1899 ntBASIC14.55□□□□□ -0.08
NrlP54846 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC14.54□□□□□ -0.08
NrlP54846 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC14.54□□□□□ -0.08
NrlP54846 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
NrlP54846 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
NrlP54846 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
NrlP54846 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
NrlP54846 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
NrlP54846 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
NrlP54846 Glrx2-202ENSMUST00000111957 580 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
NrlP54846 Gm12384-201ENSMUST00000119228 919 ntBASIC14.54□□□□□ -0.08
NrlP54846 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC14.54□□□□□ -0.08
NrlP54846 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
NrlP54846 Gm24644-201ENSMUST00000157114 139 ntBASIC14.54□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 42.3 ms