Protein–RNA interactions for Protein: P52946

Pdx1, Pancreas/duodenum homeobox protein 1, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdx1P52946 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Pdx1P52946 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC13.55□□□□□ -0.24
Pdx1P52946 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pdx1P52946 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pdx1P52946 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pdx1P52946 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pdx1P52946 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pdx1P52946 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pdx1P52946 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pdx1P52946 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC13.55□□□□□ -0.24
Pdx1P52946 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC13.55□□□□□ -0.24
Pdx1P52946 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pdx1P52946 Matn2-206ENSMUST00000228570 2798 ntBASIC13.54□□□□□ -0.24
Pdx1P52946 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Pdx1P52946 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC13.54□□□□□ -0.24
Pdx1P52946 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Pdx1P52946 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pdx1P52946 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Pdx1P52946 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC13.54□□□□□ -0.24
Pdx1P52946 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Pdx1P52946 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Pdx1P52946 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pdx1P52946 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Pdx1P52946 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pdx1P52946 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pdx1P52946 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Pdx1P52946 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pdx1P52946 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC13.54□□□□□ -0.24
Pdx1P52946 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Pdx1P52946 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pdx1P52946 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Pdx1P52946 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC13.54□□□□□ -0.24
Pdx1P52946 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC13.54□□□□□ -0.24
Pdx1P52946 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pdx1P52946 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC13.54□□□□□ -0.24
Pdx1P52946 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Pdx1P52946 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Pdx1P52946 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC13.54□□□□□ -0.24
Pdx1P52946 AC131997.1-201ENSMUST00000228611 1229 ntBASIC13.54□□□□□ -0.24
Pdx1P52946 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pdx1P52946 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pdx1P52946 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pdx1P52946 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC13.54□□□□□ -0.24
Pdx1P52946 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pdx1P52946 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pdx1P52946 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Pdx1P52946 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pdx1P52946 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC13.54□□□□□ -0.24
Pdx1P52946 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pdx1P52946 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pdx1P52946 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pdx1P52946 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pdx1P52946 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Pdx1P52946 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pdx1P52946 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pdx1P52946 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pdx1P52946 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Pdx1P52946 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pdx1P52946 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
Pdx1P52946 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Pdx1P52946 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Pdx1P52946 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pdx1P52946 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pdx1P52946 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pdx1P52946 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pdx1P52946 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Pdx1P52946 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Pdx1P52946 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pdx1P52946 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC13.53□□□□□ -0.24
Pdx1P52946 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Pdx1P52946 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC13.53□□□□□ -0.24
Pdx1P52946 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Pdx1P52946 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pdx1P52946 CT025535.1-201ENSMUST00000227172 491 ntBASIC13.53□□□□□ -0.24
Pdx1P52946 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pdx1P52946 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC13.53□□□□□ -0.24
Pdx1P52946 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Pdx1P52946 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Pdx1P52946 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pdx1P52946 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Pdx1P52946 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pdx1P52946 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pdx1P52946 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pdx1P52946 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Pdx1P52946 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Pdx1P52946 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Pdx1P52946 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pdx1P52946 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Pdx1P52946 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pdx1P52946 Gm42769-201ENSMUST00000198576 1659 ntBASIC13.53□□□□□ -0.24
Pdx1P52946 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Pdx1P52946 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Pdx1P52946 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Pdx1P52946 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pdx1P52946 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Pdx1P52946 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Pdx1P52946 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.24
Pdx1P52946 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Pdx1P52946 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Pdx1P52946 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 37.2 ms