Protein–RNA interactions for Protein: P48437

Prox1, Prospero homeobox protein 1, mousemouse

Predictions only

Length 737 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prox1P48437 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Prox1P48437 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Prox1P48437 Gm24513-201ENSMUST00000174964 138 ntBASIC13.16□□□□□ -0.3
Prox1P48437 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC13.16□□□□□ -0.3
Prox1P48437 Gm27397-201ENSMUST00000184997 107 ntBASIC13.16□□□□□ -0.3
Prox1P48437 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Prox1P48437 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Prox1P48437 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC13.16□□□□□ -0.3
Prox1P48437 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Prox1P48437 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Prox1P48437 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Prox1P48437 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Prox1P48437 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Prox1P48437 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Prox1P48437 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Prox1P48437 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Prox1P48437 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
Prox1P48437 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Prox1P48437 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Prox1P48437 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Prox1P48437 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Prox1P48437 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Prox1P48437 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Prox1P48437 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC13.15□□□□□ -0.3
Prox1P48437 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Prox1P48437 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Prox1P48437 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Prox1P48437 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Prox1P48437 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Prox1P48437 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Prox1P48437 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC13.15□□□□□ -0.3
Prox1P48437 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Prox1P48437 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC13.15□□□□□ -0.3
Prox1P48437 Rpph1-201ENSMUST00000175096 319 ntBASIC13.15□□□□□ -0.3
Prox1P48437 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Prox1P48437 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC13.15□□□□□ -0.3
Prox1P48437 Gm44492-201ENSMUST00000197012 141 ntBASIC13.15□□□□□ -0.3
Prox1P48437 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Prox1P48437 AC174742.1-201ENSMUST00000218272 304 ntBASIC13.15□□□□□ -0.3
Prox1P48437 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Prox1P48437 CT030684.1-201ENSMUST00000227292 914 ntBASIC13.15□□□□□ -0.3
Prox1P48437 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Prox1P48437 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC13.15□□□□□ -0.3
Prox1P48437 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Prox1P48437 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC13.15□□□□□ -0.3
Prox1P48437 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Prox1P48437 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC13.15□□□□□ -0.3
Prox1P48437 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Prox1P48437 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Prox1P48437 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Prox1P48437 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Prox1P48437 Gm42480-201ENSMUST00000198434 2595 ntBASIC13.15□□□□□ -0.3
Prox1P48437 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC13.15□□□□□ -0.31
Prox1P48437 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC13.15□□□□□ -0.31
Prox1P48437 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.31
Prox1P48437 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Prox1P48437 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Prox1P48437 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Prox1P48437 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Prox1P48437 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Prox1P48437 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC13.14□□□□□ -0.31
Prox1P48437 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Prox1P48437 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Prox1P48437 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Prox1P48437 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Prox1P48437 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC13.14□□□□□ -0.31
Prox1P48437 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Prox1P48437 Gm6973-201ENSMUST00000117080 721 ntBASIC13.14□□□□□ -0.31
Prox1P48437 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC13.14□□□□□ -0.31
Prox1P48437 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC13.14□□□□□ -0.31
Prox1P48437 Gm43575-201ENSMUST00000196420 516 ntBASIC13.14□□□□□ -0.31
Prox1P48437 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC13.14□□□□□ -0.31
Prox1P48437 Gm44945-201ENSMUST00000206764 1187 ntBASIC13.14□□□□□ -0.31
Prox1P48437 Ndufaf2-202ENSMUST00000223734 556 ntBASIC13.14□□□□□ -0.31
Prox1P48437 AC090659.1-201ENSMUST00000224334 768 ntBASIC13.14□□□□□ -0.31
Prox1P48437 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Prox1P48437 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Prox1P48437 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Prox1P48437 Dysf-213ENSMUST00000203803 6590 ntTSL 5 BASIC13.14□□□□□ -0.31
Prox1P48437 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Prox1P48437 Armcx1-201ENSMUST00000035748 2303 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Prox1P48437 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC13.14□□□□□ -0.31
Prox1P48437 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Prox1P48437 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Prox1P48437 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Prox1P48437 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Prox1P48437 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Prox1P48437 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Prox1P48437 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Prox1P48437 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Prox1P48437 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Prox1P48437 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Prox1P48437 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC13.14□□□□□ -0.31
Prox1P48437 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Prox1P48437 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC13.14□□□□□ -0.31
Prox1P48437 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Prox1P48437 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Prox1P48437 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Prox1P48437 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Prox1P48437 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 40.1 ms