Protein–RNA interactions for Protein: P47993

Xcl1, Lymphotactin, mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Xcl1P47993 Zfp423-201ENSMUST00000052250 4510 ntAPPRIS ALT2 TSL 1 (best) BASIC8.84□□□□□ -0.99
Xcl1P47993 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC8.84□□□□□ -0.99
Xcl1P47993 Aspm-201ENSMUST00000053364 9867 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Xcl1P47993 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Xcl1P47993 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC8.84□□□□□ -0.99
Xcl1P47993 Gm13836-201ENSMUST00000121159 501 ntBASIC8.84□□□□□ -0.99
Xcl1P47993 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
Xcl1P47993 Gm38114-201ENSMUST00000191877 1232 ntBASIC8.84□□□□□ -0.99
Xcl1P47993 Gm3807-201ENSMUST00000193520 1168 ntBASIC8.84□□□□□ -0.99
Xcl1P47993 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC8.84□□□□□ -0.99
Xcl1P47993 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC8.84□□□□□ -0.99
Xcl1P47993 Slc36a1-203ENSMUST00000108872 5264 ntAPPRIS P1 TSL 5 BASIC8.84□□□□□ -0.99
Xcl1P47993 Gm5936-201ENSMUST00000114116 2857 ntAPPRIS P1 TSL 3 BASIC8.84□□□□□ -0.99
Xcl1P47993 Gm5640-201ENSMUST00000114119 2861 ntAPPRIS P1 TSL 3 BASIC8.84□□□□□ -0.99
Xcl1P47993 DXBay18-201ENSMUST00000080324 2862 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Xcl1P47993 Gm14685-201ENSMUST00000088459 2864 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Xcl1P47993 Mroh5-202ENSMUST00000110021 2145 ntAPPRIS ALT2 TSL 1 (best) BASIC8.84□□□□□ -0.99
Xcl1P47993 Grm7-202ENSMUST00000172951 4197 ntAPPRIS P3 TSL 1 (best) BASIC8.84□□□□□ -0.99
Xcl1P47993 AC154725.1-201ENSMUST00000224826 1961 ntBASIC8.84□□□□□ -0.99
Xcl1P47993 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Xcl1P47993 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC8.84□□□□□ -0.99
Xcl1P47993 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC8.84□□□□□ -0.99
Xcl1P47993 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC8.84□□□□□ -0.99
Xcl1P47993 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
Xcl1P47993 Rapgef6-202ENSMUST00000101206 5864 ntAPPRIS ALT2 TSL 5 BASIC8.84□□□□□ -0.99
Xcl1P47993 A930024N18Rik-201ENSMUST00000181251 3955 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
Xcl1P47993 Srrm2-201ENSMUST00000088621 8564 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
Xcl1P47993 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Xcl1P47993 Slc20a1-202ENSMUST00000110315 3219 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Xcl1P47993 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Xcl1P47993 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -1
Xcl1P47993 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC8.84□□□□□ -1
Xcl1P47993 Rph3a-201ENSMUST00000079204 4150 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Xcl1P47993 3110062M04Rik-203ENSMUST00000115007 3326 ntAPPRIS P3 TSL 1 (best) BASIC8.83□□□□□ -1
Xcl1P47993 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC8.83□□□□□ -1
Xcl1P47993 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC8.83□□□□□ -1
Xcl1P47993 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC8.83□□□□□ -1
Xcl1P47993 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Xcl1P47993 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC8.83□□□□□ -1
Xcl1P47993 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC8.83□□□□□ -1
Xcl1P47993 Dcaf17-209ENSMUST00000154704 7739 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Xcl1P47993 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Xcl1P47993 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC8.83□□□□□ -1
Xcl1P47993 Cep250-204ENSMUST00000109619 7977 ntAPPRIS P4 TSL 5 BASIC8.83□□□□□ -1
Xcl1P47993 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Xcl1P47993 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Xcl1P47993 Pygo2-202ENSMUST00000107413 2911 ntTSL 1 (best) BASIC8.83□□□□□ -1
Xcl1P47993 Cyb5rl-201ENSMUST00000030364 2360 ntTSL 1 (best) BASIC8.83□□□□□ -1
Xcl1P47993 Asap1-203ENSMUST00000110115 4535 ntAPPRIS ALT2 TSL 5 BASIC8.83□□□□□ -1
Xcl1P47993 Gm38569-201ENSMUST00000205476 2228 ntTSL 1 (best) BASIC8.83□□□□□ -1
Xcl1P47993 AC127597.1-201ENSMUST00000225697 5711 ntBASIC8.83□□□□□ -1
Xcl1P47993 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Xcl1P47993 Fibcd1-201ENSMUST00000028188 4751 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Xcl1P47993 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC8.83□□□□□ -1
Xcl1P47993 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC8.83□□□□□ -1
Xcl1P47993 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC8.83□□□□□ -1
Xcl1P47993 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC8.83□□□□□ -1
Xcl1P47993 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC8.83□□□□□ -1
Xcl1P47993 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC8.83□□□□□ -1
Xcl1P47993 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC8.83□□□□□ -1
Xcl1P47993 Gm29994-201ENSMUST00000195495 1193 ntBASIC8.83□□□□□ -1
Xcl1P47993 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Xcl1P47993 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC8.83□□□□□ -1
Xcl1P47993 AC156016.1-201ENSMUST00000227190 1035 ntBASIC8.83□□□□□ -1
Xcl1P47993 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC8.83□□□□□ -1
Xcl1P47993 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Xcl1P47993 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC8.83□□□□□ -1
Xcl1P47993 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Xcl1P47993 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Xcl1P47993 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Xcl1P47993 Gucy1a3-204ENSMUST00000193924 4710 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Xcl1P47993 Emc1-201ENSMUST00000042096 4706 ntAPPRIS P3 TSL 1 (best) BASIC8.83□□□□□ -1
Xcl1P47993 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Xcl1P47993 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Xcl1P47993 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Xcl1P47993 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC8.83□□□□□ -1
Xcl1P47993 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC8.83□□□□□ -1
Xcl1P47993 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC8.83□□□□□ -1
Xcl1P47993 C230014O12Rik-201ENSMUST00000134921 2668 ntTSL 1 (best) BASIC8.83□□□□□ -1
Xcl1P47993 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC8.83□□□□□ -1
Xcl1P47993 Madd-213ENSMUST00000111376 5927 ntAPPRIS ALT2 TSL 5 BASIC8.83□□□□□ -1
Xcl1P47993 Yars-201ENSMUST00000106054 2909 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Xcl1P47993 Gm28036-202ENSMUST00000132494 5505 ntAPPRIS P5 TSL 2 BASIC8.83□□□□□ -1
Xcl1P47993 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC8.83□□□□□ -1
Xcl1P47993 Gfm1-201ENSMUST00000077271 4078 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Xcl1P47993 Prkd1-201ENSMUST00000002765 3653 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Xcl1P47993 Cep250-202ENSMUST00000094421 7919 ntAPPRIS ALT2 TSL 5 BASIC8.83□□□□□ -1
Xcl1P47993 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Xcl1P47993 Pcdhb17-201ENSMUST00000053856 4660 ntAPPRIS P1 BASIC8.83□□□□□ -1
Xcl1P47993 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC8.83□□□□□ -1
Xcl1P47993 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC8.83□□□□□ -1
Xcl1P47993 Col11a1-201ENSMUST00000092155 7667 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Xcl1P47993 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Xcl1P47993 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Xcl1P47993 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Xcl1P47993 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC8.82□□□□□ -1
Xcl1P47993 Trim55-201ENSMUST00000029139 2595 ntAPPRIS P1 TSL 2 BASIC8.82□□□□□ -1
Xcl1P47993 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Xcl1P47993 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Xcl1P47993 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC8.82□□□□□ -1
Retrieved 100 of 76,532 protein–RNA pairs in 21.1 ms