Protein–RNA interactions for Protein: P43680

Sox18, Transcription factor SOX-18, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox18P43680 Gm11755-201ENSMUST00000144096 891 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Sox18P43680 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC13.16□□□□□ -0.3
Sox18P43680 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sox18P43680 Vmn1r-ps144-201ENSMUST00000177291 939 ntBASIC13.16□□□□□ -0.3
Sox18P43680 Gm27682-201ENSMUST00000183930 110 ntBASIC13.16□□□□□ -0.3
Sox18P43680 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Sox18P43680 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC13.16□□□□□ -0.3
Sox18P43680 Gm43133-201ENSMUST00000197472 463 ntBASIC13.16□□□□□ -0.3
Sox18P43680 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC13.16□□□□□ -0.3
Sox18P43680 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Sox18P43680 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC13.16□□□□□ -0.3
Sox18P43680 Dnajc17-201ENSMUST00000038439 1008 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sox18P43680 Nr0b2-201ENSMUST00000042706 1132 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sox18P43680 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Sox18P43680 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sox18P43680 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Sox18P43680 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sox18P43680 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sox18P43680 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sox18P43680 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sox18P43680 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Sox18P43680 Gm9252-201ENSMUST00000172364 1602 ntBASIC13.16□□□□□ -0.3
Sox18P43680 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sox18P43680 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Sox18P43680 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sox18P43680 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sox18P43680 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sox18P43680 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sox18P43680 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sox18P43680 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Sox18P43680 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Sox18P43680 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Sox18P43680 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC13.15□□□□□ -0.3
Sox18P43680 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Sox18P43680 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Sox18P43680 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Sox18P43680 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Sox18P43680 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Sox18P43680 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Sox18P43680 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Sox18P43680 Gm12485-201ENSMUST00000119641 291 ntBASIC13.15□□□□□ -0.3
Sox18P43680 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC13.15□□□□□ -0.3
Sox18P43680 2310057J18Rik-201ENSMUST00000015663 1238 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Sox18P43680 Creb3-206ENSMUST00000167751 1212 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Sox18P43680 Proscos-202ENSMUST00000178990 666 ntBASIC13.15□□□□□ -0.3
Sox18P43680 Gm27772-201ENSMUST00000184900 187 ntBASIC13.15□□□□□ -0.3
Sox18P43680 1700041M19Rik-202ENSMUST00000190908 1123 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Sox18P43680 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC13.15□□□□□ -0.3
Sox18P43680 Gm43138-201ENSMUST00000199123 708 ntBASIC13.15□□□□□ -0.3
Sox18P43680 Gm45865-201ENSMUST00000211815 945 ntBASIC13.15□□□□□ -0.3
Sox18P43680 Gm33056-201ENSMUST00000213234 1120 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Sox18P43680 AC155237.1-201ENSMUST00000226196 1279 ntBASIC13.15□□□□□ -0.3
Sox18P43680 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Sox18P43680 Cma2-201ENSMUST00000089555 947 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Sox18P43680 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Sox18P43680 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Sox18P43680 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Sox18P43680 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Sox18P43680 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Sox18P43680 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Sox18P43680 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Sox18P43680 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Sox18P43680 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Sox18P43680 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Sox18P43680 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC13.15□□□□□ -0.3
Sox18P43680 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Sox18P43680 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Sox18P43680 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Sox18P43680 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Sox18P43680 Mfsd4b5-205ENSMUST00000170579 1554 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
Sox18P43680 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Sox18P43680 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Sox18P43680 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Sox18P43680 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.31
Sox18P43680 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.31
Sox18P43680 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Sox18P43680 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC13.14□□□□□ -0.31
Sox18P43680 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Sox18P43680 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Sox18P43680 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC13.14□□□□□ -0.31
Sox18P43680 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Sox18P43680 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Sox18P43680 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Sox18P43680 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Sox18P43680 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Sox18P43680 Gm8213-201ENSMUST00000118191 441 ntBASIC13.14□□□□□ -0.31
Sox18P43680 Gm12241-201ENSMUST00000118330 726 ntBASIC13.14□□□□□ -0.31
Sox18P43680 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Sox18P43680 Gm11210-201ENSMUST00000150203 422 ntTSL 3 BASIC13.14□□□□□ -0.31
Sox18P43680 Gm27320-201ENSMUST00000184892 109 ntBASIC13.14□□□□□ -0.31
Sox18P43680 Ighv8-14-201ENSMUST00000196781 358 ntBASIC13.14□□□□□ -0.31
Sox18P43680 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC13.14□□□□□ -0.31
Sox18P43680 Olfr284-202ENSMUST00000206647 966 ntBASIC13.14□□□□□ -0.31
Sox18P43680 6430710M23Rik-201ENSMUST00000210843 1191 ntBASIC13.14□□□□□ -0.31
Sox18P43680 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC13.14□□□□□ -0.31
Sox18P43680 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC13.14□□□□□ -0.31
Sox18P43680 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Sox18P43680 Tsc22d4-201ENSMUST00000031738 1043 ntTSL 3 BASIC13.14□□□□□ -0.31
Sox18P43680 Olfr171-201ENSMUST00000079891 945 ntAPPRIS P2 BASIC13.14□□□□□ -0.31
Sox18P43680 Hormad1-201ENSMUST00000029754 1385 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms