Protein–RNA interactions for Protein: P43488

Tnfsf4, Tumor necrosis factor ligand superfamily member 4, mousemouse

Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf4P43488 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Tnfsf4P43488 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Tnfsf4P43488 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Tnfsf4P43488 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Tnfsf4P43488 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Tnfsf4P43488 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC13.23□□□□□ -0.29
Tnfsf4P43488 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Tnfsf4P43488 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Tnfsf4P43488 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Tnfsf4P43488 Gm22065-201ENSMUST00000103753 110 ntBASIC13.23□□□□□ -0.29
Tnfsf4P43488 Gm22066-201ENSMUST00000103761 110 ntBASIC13.23□□□□□ -0.29
Tnfsf4P43488 Gm24932-201ENSMUST00000103763 110 ntBASIC13.23□□□□□ -0.29
Tnfsf4P43488 Gm24115-201ENSMUST00000103799 110 ntBASIC13.23□□□□□ -0.29
Tnfsf4P43488 Gm22190-201ENSMUST00000103827 110 ntBASIC13.23□□□□□ -0.29
Tnfsf4P43488 Gm22191-201ENSMUST00000103831 110 ntBASIC13.23□□□□□ -0.29
Tnfsf4P43488 Gm24721-201ENSMUST00000103849 110 ntBASIC13.23□□□□□ -0.29
Tnfsf4P43488 Gm28018-201ENSMUST00000103869 110 ntBASIC13.23□□□□□ -0.29
Tnfsf4P43488 Gm26399-201ENSMUST00000103937 110 ntBASIC13.23□□□□□ -0.29
Tnfsf4P43488 Gm10327-201ENSMUST00000105222 1002 ntBASIC13.23□□□□□ -0.29
Tnfsf4P43488 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
Tnfsf4P43488 Gm25349-201ENSMUST00000177728 110 ntBASIC13.23□□□□□ -0.29
Tnfsf4P43488 Gm23616-201ENSMUST00000177797 110 ntBASIC13.23□□□□□ -0.29
Tnfsf4P43488 Gm25871-201ENSMUST00000177816 110 ntBASIC13.23□□□□□ -0.29
Tnfsf4P43488 Gm24752-201ENSMUST00000178240 110 ntBASIC13.23□□□□□ -0.29
Tnfsf4P43488 Gm24496-201ENSMUST00000178287 110 ntBASIC13.23□□□□□ -0.29
Tnfsf4P43488 Gm25649-201ENSMUST00000178476 110 ntBASIC13.23□□□□□ -0.29
Tnfsf4P43488 Gm25548-201ENSMUST00000178681 110 ntBASIC13.23□□□□□ -0.29
Tnfsf4P43488 Gm23147-201ENSMUST00000178841 110 ntBASIC13.23□□□□□ -0.29
Tnfsf4P43488 Gm26095-201ENSMUST00000179270 110 ntBASIC13.23□□□□□ -0.29
Tnfsf4P43488 Gm22171-201ENSMUST00000179283 110 ntBASIC13.23□□□□□ -0.29
Tnfsf4P43488 Gm23936-201ENSMUST00000179354 110 ntBASIC13.23□□□□□ -0.29
Tnfsf4P43488 Gm22619-201ENSMUST00000179516 110 ntBASIC13.23□□□□□ -0.29
Tnfsf4P43488 Gm25255-201ENSMUST00000179579 110 ntBASIC13.23□□□□□ -0.29
Tnfsf4P43488 Gm24755-201ENSMUST00000179691 110 ntBASIC13.23□□□□□ -0.29
Tnfsf4P43488 Gm26506-201ENSMUST00000179692 110 ntBASIC13.23□□□□□ -0.29
Tnfsf4P43488 Gm25086-201ENSMUST00000179931 110 ntBASIC13.23□□□□□ -0.29
Tnfsf4P43488 Gm23243-201ENSMUST00000180047 110 ntBASIC13.23□□□□□ -0.29
Tnfsf4P43488 Gm24659-201ENSMUST00000180212 110 ntBASIC13.23□□□□□ -0.29
Tnfsf4P43488 Gm24169-201ENSMUST00000180244 110 ntBASIC13.23□□□□□ -0.29
Tnfsf4P43488 Gm23689-201ENSMUST00000180354 110 ntBASIC13.23□□□□□ -0.29
Tnfsf4P43488 Gm27359-201ENSMUST00000184153 110 ntBASIC13.23□□□□□ -0.29
Tnfsf4P43488 Gm27785-201ENSMUST00000184268 110 ntBASIC13.23□□□□□ -0.29
Tnfsf4P43488 Gm27466-201ENSMUST00000184396 110 ntBASIC13.23□□□□□ -0.29
Tnfsf4P43488 Gm27703-201ENSMUST00000184836 110 ntBASIC13.23□□□□□ -0.29
Tnfsf4P43488 Gm5069-202ENSMUST00000192714 1011 ntBASIC13.23□□□□□ -0.29
Tnfsf4P43488 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Tnfsf4P43488 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Tnfsf4P43488 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC13.23□□□□□ -0.29
Tnfsf4P43488 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC13.23□□□□□ -0.29
Tnfsf4P43488 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Tnfsf4P43488 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Tnfsf4P43488 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Tnfsf4P43488 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Tnfsf4P43488 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC13.23□□□□□ -0.29
Tnfsf4P43488 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Tnfsf4P43488 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Tnfsf4P43488 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Tnfsf4P43488 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC13.22□□□□□ -0.29
Tnfsf4P43488 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Tnfsf4P43488 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Tnfsf4P43488 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Tnfsf4P43488 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Tnfsf4P43488 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Tnfsf4P43488 Gm37644-201ENSMUST00000192190 2270 ntBASIC13.22□□□□□ -0.29
Tnfsf4P43488 Myh7-201ENSMUST00000102803 6135 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Tnfsf4P43488 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Tnfsf4P43488 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Tnfsf4P43488 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC13.22□□□□□ -0.29
Tnfsf4P43488 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC13.22□□□□□ -0.29
Tnfsf4P43488 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Tnfsf4P43488 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Tnfsf4P43488 AC166997.1-201ENSMUST00000225122 572 ntBASIC13.22□□□□□ -0.29
Tnfsf4P43488 AC154806.6-201ENSMUST00000228192 202 ntBASIC13.22□□□□□ -0.29
Tnfsf4P43488 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Tnfsf4P43488 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Tnfsf4P43488 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Tnfsf4P43488 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Tnfsf4P43488 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Tnfsf4P43488 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Tnfsf4P43488 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Tnfsf4P43488 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Tnfsf4P43488 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Tnfsf4P43488 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Tnfsf4P43488 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Tnfsf4P43488 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Tnfsf4P43488 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Tnfsf4P43488 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Tnfsf4P43488 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Tnfsf4P43488 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Tnfsf4P43488 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Tnfsf4P43488 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Tnfsf4P43488 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Tnfsf4P43488 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Tnfsf4P43488 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC13.21□□□□□ -0.29
Tnfsf4P43488 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
Tnfsf4P43488 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Tnfsf4P43488 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Tnfsf4P43488 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC13.21□□□□□ -0.29
Tnfsf4P43488 Gm5648-201ENSMUST00000122244 1587 ntBASIC13.21□□□□□ -0.29
Tnfsf4P43488 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 39.4 ms