Protein–RNA interactions for Protein: P43275

Hist1h1a, Histone H1.1, mousemouse

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hist1h1aP43275 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Hist1h1aP43275 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Hist1h1aP43275 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Hist1h1aP43275 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Hist1h1aP43275 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Hist1h1aP43275 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Hist1h1aP43275 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC11.31□□□□□ -0.6
Hist1h1aP43275 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Hist1h1aP43275 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Hist1h1aP43275 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Hist1h1aP43275 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Hist1h1aP43275 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Hist1h1aP43275 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Hist1h1aP43275 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Hist1h1aP43275 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Hist1h1aP43275 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Hist1h1aP43275 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Hist1h1aP43275 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Hist1h1aP43275 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Hist1h1aP43275 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Hist1h1aP43275 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Hist1h1aP43275 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Hist1h1aP43275 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Hist1h1aP43275 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Hist1h1aP43275 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Hist1h1aP43275 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Hist1h1aP43275 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Hist1h1aP43275 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Hist1h1aP43275 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Hist1h1aP43275 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Hist1h1aP43275 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Hist1h1aP43275 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC11.3□□□□□ -0.6
Hist1h1aP43275 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Hist1h1aP43275 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Hist1h1aP43275 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Hist1h1aP43275 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Hist1h1aP43275 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Hist1h1aP43275 Nudt18-203ENSMUST00000228768 1578 ntBASIC11.3□□□□□ -0.6
Hist1h1aP43275 Chrna10-201ENSMUST00000084830 2513 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Hist1h1aP43275 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC11.3□□□□□ -0.6
Hist1h1aP43275 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC11.3□□□□□ -0.6
Hist1h1aP43275 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC11.3□□□□□ -0.6
Hist1h1aP43275 Gm15467-201ENSMUST00000120582 445 ntBASIC11.3□□□□□ -0.6
Hist1h1aP43275 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC11.3□□□□□ -0.6
Hist1h1aP43275 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC11.3□□□□□ -0.6
Hist1h1aP43275 Rprl2-201ENSMUST00000157150 290 ntBASIC11.3□□□□□ -0.6
Hist1h1aP43275 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC11.3□□□□□ -0.6
Hist1h1aP43275 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
Hist1h1aP43275 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Hist1h1aP43275 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC11.3□□□□□ -0.6
Hist1h1aP43275 Gm29310-201ENSMUST00000185468 696 ntBASIC11.3□□□□□ -0.6
Hist1h1aP43275 Gm21825-201ENSMUST00000185728 696 ntBASIC11.3□□□□□ -0.6
Hist1h1aP43275 Gm29109-201ENSMUST00000185895 696 ntBASIC11.3□□□□□ -0.6
Hist1h1aP43275 Gm21896-201ENSMUST00000186520 696 ntBASIC11.3□□□□□ -0.6
Hist1h1aP43275 Gm21873-201ENSMUST00000186728 696 ntBASIC11.3□□□□□ -0.6
Hist1h1aP43275 Gm21794-201ENSMUST00000187056 696 ntBASIC11.3□□□□□ -0.6
Hist1h1aP43275 Gm21880-201ENSMUST00000187275 696 ntBASIC11.3□□□□□ -0.6
Hist1h1aP43275 Gm21826-201ENSMUST00000187451 696 ntBASIC11.3□□□□□ -0.6
Hist1h1aP43275 Gm21198-201ENSMUST00000188393 696 ntBASIC11.3□□□□□ -0.6
Hist1h1aP43275 Gm21749-201ENSMUST00000189343 696 ntBASIC11.3□□□□□ -0.6
Hist1h1aP43275 Gm21901-201ENSMUST00000189568 696 ntBASIC11.3□□□□□ -0.6
Hist1h1aP43275 Gm29424-201ENSMUST00000189716 696 ntBASIC11.3□□□□□ -0.6
Hist1h1aP43275 Gm28599-201ENSMUST00000189838 694 ntBASIC11.3□□□□□ -0.6
Hist1h1aP43275 Gm21867-201ENSMUST00000189917 696 ntBASIC11.3□□□□□ -0.6
Hist1h1aP43275 Gm29269-201ENSMUST00000190087 696 ntBASIC11.3□□□□□ -0.6
Hist1h1aP43275 Gm21722-201ENSMUST00000190153 696 ntBASIC11.3□□□□□ -0.6
Hist1h1aP43275 Gm28423-201ENSMUST00000190701 696 ntBASIC11.3□□□□□ -0.6
Hist1h1aP43275 Gm21899-201ENSMUST00000190745 696 ntBASIC11.3□□□□□ -0.6
Hist1h1aP43275 Gm21910-201ENSMUST00000191163 696 ntBASIC11.3□□□□□ -0.6
Hist1h1aP43275 Gm21849-201ENSMUST00000191571 696 ntBASIC11.3□□□□□ -0.6
Hist1h1aP43275 Gm28678-201ENSMUST00000191593 696 ntBASIC11.3□□□□□ -0.6
Hist1h1aP43275 Gm20910-201ENSMUST00000193268 696 ntBASIC11.3□□□□□ -0.6
Hist1h1aP43275 Gm21871-201ENSMUST00000194621 696 ntBASIC11.3□□□□□ -0.6
Hist1h1aP43275 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Hist1h1aP43275 Gm44608-201ENSMUST00000206827 855 ntBASIC11.3□□□□□ -0.6
Hist1h1aP43275 Gm45612-201ENSMUST00000211320 160 ntBASIC11.3□□□□□ -0.6
Hist1h1aP43275 AC158529.1-201ENSMUST00000223618 239 ntBASIC11.3□□□□□ -0.6
Hist1h1aP43275 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Hist1h1aP43275 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Hist1h1aP43275 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Hist1h1aP43275 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Hist1h1aP43275 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC11.3□□□□□ -0.6
Hist1h1aP43275 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Hist1h1aP43275 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Hist1h1aP43275 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Hist1h1aP43275 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Hist1h1aP43275 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Hist1h1aP43275 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Hist1h1aP43275 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Hist1h1aP43275 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Hist1h1aP43275 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Hist1h1aP43275 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
Hist1h1aP43275 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Hist1h1aP43275 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Hist1h1aP43275 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Hist1h1aP43275 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Hist1h1aP43275 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Hist1h1aP43275 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Hist1h1aP43275 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC11.29□□□□□ -0.6
Hist1h1aP43275 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 53.5 ms