Protein–RNA interactions for Protein: P39038

Cdh4, Cadherin-4, mousemouse

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh4P39038 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cdh4P39038 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Cdh4P39038 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC13.13□□□□□ -0.31
Cdh4P39038 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Cdh4P39038 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC13.13□□□□□ -0.31
Cdh4P39038 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cdh4P39038 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cdh4P39038 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cdh4P39038 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cdh4P39038 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Cdh4P39038 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cdh4P39038 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC13.13□□□□□ -0.31
Cdh4P39038 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
Cdh4P39038 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cdh4P39038 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC13.13□□□□□ -0.31
Cdh4P39038 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cdh4P39038 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cdh4P39038 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC13.12□□□□□ -0.31
Cdh4P39038 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cdh4P39038 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cdh4P39038 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cdh4P39038 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cdh4P39038 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cdh4P39038 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC13.12□□□□□ -0.31
Cdh4P39038 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cdh4P39038 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC13.12□□□□□ -0.31
Cdh4P39038 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cdh4P39038 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC13.12□□□□□ -0.31
Cdh4P39038 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cdh4P39038 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Cdh4P39038 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cdh4P39038 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cdh4P39038 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC13.12□□□□□ -0.31
Cdh4P39038 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cdh4P39038 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cdh4P39038 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cdh4P39038 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cdh4P39038 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cdh4P39038 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cdh4P39038 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cdh4P39038 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cdh4P39038 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Cdh4P39038 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cdh4P39038 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC13.12□□□□□ -0.31
Cdh4P39038 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC13.12□□□□□ -0.31
Cdh4P39038 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Cdh4P39038 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Cdh4P39038 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cdh4P39038 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
Cdh4P39038 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cdh4P39038 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cdh4P39038 Gm15889-202ENSMUST00000212669 2443 ntBASIC13.11□□□□□ -0.31
Cdh4P39038 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cdh4P39038 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cdh4P39038 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC13.11□□□□□ -0.31
Cdh4P39038 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC13.11□□□□□ -0.31
Cdh4P39038 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cdh4P39038 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cdh4P39038 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Cdh4P39038 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cdh4P39038 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Cdh4P39038 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC13.11□□□□□ -0.31
Cdh4P39038 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC13.11□□□□□ -0.31
Cdh4P39038 Gm12859-201ENSMUST00000117834 427 ntBASIC13.11□□□□□ -0.31
Cdh4P39038 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC13.11□□□□□ -0.31
Cdh4P39038 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
Cdh4P39038 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cdh4P39038 Gm27772-201ENSMUST00000184900 187 ntBASIC13.11□□□□□ -0.31
Cdh4P39038 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC13.11□□□□□ -0.31
Cdh4P39038 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Cdh4P39038 Gm5279-201ENSMUST00000199575 745 ntBASIC13.11□□□□□ -0.31
Cdh4P39038 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cdh4P39038 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Cdh4P39038 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Cdh4P39038 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cdh4P39038 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cdh4P39038 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cdh4P39038 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cdh4P39038 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cdh4P39038 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cdh4P39038 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC13.11□□□□□ -0.31
Cdh4P39038 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cdh4P39038 AC164107.1-201ENSMUST00000227730 2161 ntBASIC13.11□□□□□ -0.31
Cdh4P39038 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC13.11□□□□□ -0.31
Cdh4P39038 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Cdh4P39038 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Cdh4P39038 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Cdh4P39038 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cdh4P39038 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cdh4P39038 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cdh4P39038 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Cdh4P39038 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cdh4P39038 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cdh4P39038 Zkscan14-203ENSMUST00000198959 2243 ntBASIC13.11□□□□□ -0.31
Cdh4P39038 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cdh4P39038 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Cdh4P39038 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cdh4P39038 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC13.1□□□□□ -0.31
Cdh4P39038 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cdh4P39038 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC13.1□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 56.4 ms