Protein–RNA interactions for Protein: P35582

Foxa1, Hepatocyte nuclear factor 3-alpha, mousemouse

Predictions only

Length 468 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxa1P35582 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Foxa1P35582 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC12.67□□□□□ -0.38
Foxa1P35582 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Foxa1P35582 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Foxa1P35582 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Foxa1P35582 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Foxa1P35582 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Foxa1P35582 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Foxa1P35582 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Foxa1P35582 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Foxa1P35582 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Foxa1P35582 Gm43399-201ENSMUST00000202546 2374 ntBASIC12.66□□□□□ -0.38
Foxa1P35582 Gm19863-201ENSMUST00000192480 2218 ntBASIC12.66□□□□□ -0.38
Foxa1P35582 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Foxa1P35582 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Foxa1P35582 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Foxa1P35582 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Foxa1P35582 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Foxa1P35582 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Foxa1P35582 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Foxa1P35582 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Foxa1P35582 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC12.66□□□□□ -0.38
Foxa1P35582 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Foxa1P35582 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Foxa1P35582 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Foxa1P35582 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Foxa1P35582 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Foxa1P35582 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Foxa1P35582 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Foxa1P35582 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC12.66□□□□□ -0.38
Foxa1P35582 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Foxa1P35582 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC12.66□□□□□ -0.38
Foxa1P35582 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Foxa1P35582 Gm5866-201ENSMUST00000177881 973 ntBASIC12.66□□□□□ -0.38
Foxa1P35582 Gm27772-201ENSMUST00000184900 187 ntBASIC12.66□□□□□ -0.38
Foxa1P35582 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC12.66□□□□□ -0.38
Foxa1P35582 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC12.66□□□□□ -0.38
Foxa1P35582 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC12.66□□□□□ -0.38
Foxa1P35582 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC12.66□□□□□ -0.38
Foxa1P35582 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Foxa1P35582 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Foxa1P35582 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Foxa1P35582 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Foxa1P35582 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC12.66□□□□□ -0.38
Foxa1P35582 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Foxa1P35582 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC12.66□□□□□ -0.38
Foxa1P35582 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Foxa1P35582 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC12.66□□□□□ -0.38
Foxa1P35582 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Foxa1P35582 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Foxa1P35582 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Foxa1P35582 AC161252.3-201ENSMUST00000225465 1549 ntBASIC12.66□□□□□ -0.38
Foxa1P35582 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Foxa1P35582 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Foxa1P35582 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Foxa1P35582 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Foxa1P35582 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Foxa1P35582 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Foxa1P35582 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Foxa1P35582 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Foxa1P35582 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC12.66□□□□□ -0.38
Foxa1P35582 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Foxa1P35582 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Foxa1P35582 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Foxa1P35582 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Foxa1P35582 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Foxa1P35582 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC12.65□□□□□ -0.38
Foxa1P35582 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Foxa1P35582 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Foxa1P35582 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Foxa1P35582 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Foxa1P35582 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Foxa1P35582 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Foxa1P35582 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Foxa1P35582 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC12.65□□□□□ -0.38
Foxa1P35582 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Foxa1P35582 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC12.65□□□□□ -0.38
Foxa1P35582 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Foxa1P35582 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Foxa1P35582 CT025535.1-201ENSMUST00000227172 491 ntBASIC12.65□□□□□ -0.38
Foxa1P35582 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Foxa1P35582 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC12.65□□□□□ -0.38
Foxa1P35582 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Foxa1P35582 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Foxa1P35582 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC12.65□□□□□ -0.38
Foxa1P35582 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Foxa1P35582 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Foxa1P35582 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Foxa1P35582 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC12.65□□□□□ -0.38
Foxa1P35582 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Foxa1P35582 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC12.65□□□□□ -0.38
Foxa1P35582 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Foxa1P35582 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.39
Foxa1P35582 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.39
Foxa1P35582 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Foxa1P35582 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.39
Foxa1P35582 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC12.65□□□□□ -0.39
Foxa1P35582 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC12.65□□□□□ -0.39
Foxa1P35582 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Foxa1P35582 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 52.4 ms