Protein–RNA interactions for Protein: P33435

Mmp13, Collagenase 3, mousemouse

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp13P33435 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Mmp13P33435 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Mmp13P33435 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Mmp13P33435 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Mmp13P33435 Gm24543-201ENSMUST00000103867 82 ntBASIC14.04□□□□□ -0.16
Mmp13P33435 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC14.04□□□□□ -0.16
Mmp13P33435 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Mmp13P33435 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC14.04□□□□□ -0.16
Mmp13P33435 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Mmp13P33435 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Mmp13P33435 Gm20949-201ENSMUST00000206478 952 ntBASIC14.04□□□□□ -0.16
Mmp13P33435 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Mmp13P33435 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Mmp13P33435 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Mmp13P33435 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Mmp13P33435 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Mmp13P33435 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Mmp13P33435 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Mmp13P33435 BC001981-202ENSMUST00000191393 1545 ntBASIC14.04□□□□□ -0.16
Mmp13P33435 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Mmp13P33435 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Mmp13P33435 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Mmp13P33435 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Mmp13P33435 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Mmp13P33435 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Mmp13P33435 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Mmp13P33435 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Mmp13P33435 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Mmp13P33435 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Mmp13P33435 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Mmp13P33435 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Mmp13P33435 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Mmp13P33435 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Mmp13P33435 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Mmp13P33435 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC14.03□□□□□ -0.16
Mmp13P33435 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Mmp13P33435 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Mmp13P33435 Pcgf5-211ENSMUST00000225920 6443 ntBASIC14.03□□□□□ -0.16
Mmp13P33435 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Mmp13P33435 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC14.03□□□□□ -0.16
Mmp13P33435 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Mmp13P33435 Gm13453-201ENSMUST00000118708 357 ntBASIC14.03□□□□□ -0.16
Mmp13P33435 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC14.03□□□□□ -0.16
Mmp13P33435 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC14.03□□□□□ -0.16
Mmp13P33435 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC14.03□□□□□ -0.16
Mmp13P33435 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Mmp13P33435 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Mmp13P33435 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Mmp13P33435 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Mmp13P33435 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Mmp13P33435 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Mmp13P33435 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC14.03□□□□□ -0.16
Mmp13P33435 Rbfox2-208ENSMUST00000227930 1218 ntBASIC14.03□□□□□ -0.16
Mmp13P33435 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Mmp13P33435 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Mmp13P33435 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Mmp13P33435 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Mmp13P33435 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Mmp13P33435 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC14.03□□□□□ -0.16
Mmp13P33435 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Mmp13P33435 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Mmp13P33435 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Mmp13P33435 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Mmp13P33435 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Mmp13P33435 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Mmp13P33435 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Mmp13P33435 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Mmp13P33435 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Mmp13P33435 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Mmp13P33435 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Mmp13P33435 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Mmp13P33435 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Mmp13P33435 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Mmp13P33435 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Mmp13P33435 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Mmp13P33435 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Mmp13P33435 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC14.02□□□□□ -0.16
Mmp13P33435 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Mmp13P33435 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Mmp13P33435 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Mmp13P33435 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC14.02□□□□□ -0.16
Mmp13P33435 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Mmp13P33435 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Mmp13P33435 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Mmp13P33435 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC14.02□□□□□ -0.16
Mmp13P33435 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Mmp13P33435 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
Mmp13P33435 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Mmp13P33435 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Mmp13P33435 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Mmp13P33435 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC14.02□□□□□ -0.17
Mmp13P33435 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC14.02□□□□□ -0.17
Mmp13P33435 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Mmp13P33435 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Mmp13P33435 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Mmp13P33435 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Mmp13P33435 Gm18041-201ENSMUST00000218210 618 ntBASIC14.02□□□□□ -0.17
Mmp13P33435 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC14.02□□□□□ -0.17
Mmp13P33435 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Mmp13P33435 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 38.6 ms