Protein–RNA interactions for Protein: P31245

Hoxa2, Homeobox protein Hox-A2, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa2P31245 Gm43981-201ENSMUST00000203285 1467 ntBASIC13.85□□□□□ -0.19
Hoxa2P31245 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Hoxa2P31245 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Hoxa2P31245 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Hoxa2P31245 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Hoxa2P31245 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Hoxa2P31245 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Hoxa2P31245 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Hoxa2P31245 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Hoxa2P31245 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Hoxa2P31245 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Hoxa2P31245 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Hoxa2P31245 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Hoxa2P31245 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Hoxa2P31245 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Hoxa2P31245 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Hoxa2P31245 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Hoxa2P31245 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Hoxa2P31245 Prl8a6-203ENSMUST00000110355 843 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Hoxa2P31245 Gm11877-201ENSMUST00000118921 852 ntBASIC13.84□□□□□ -0.19
Hoxa2P31245 Gm15225-201ENSMUST00000120449 1017 ntBASIC13.84□□□□□ -0.19
Hoxa2P31245 Gm15321-201ENSMUST00000121290 288 ntBASIC13.84□□□□□ -0.19
Hoxa2P31245 Gm15245-201ENSMUST00000129410 1186 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Hoxa2P31245 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Hoxa2P31245 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Hoxa2P31245 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Hoxa2P31245 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC13.84□□□□□ -0.19
Hoxa2P31245 Smr2-202ENSMUST00000196070 813 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Hoxa2P31245 Gm5186-201ENSMUST00000218781 920 ntBASIC13.84□□□□□ -0.19
Hoxa2P31245 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC13.84□□□□□ -0.19
Hoxa2P31245 Gm46436-201ENSMUST00000221851 1294 ntBASIC13.84□□□□□ -0.19
Hoxa2P31245 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Hoxa2P31245 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Hoxa2P31245 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
Hoxa2P31245 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Hoxa2P31245 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Hoxa2P31245 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Hoxa2P31245 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC13.84□□□□□ -0.19
Hoxa2P31245 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Hoxa2P31245 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC13.84□□□□□ -0.19
Hoxa2P31245 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Hoxa2P31245 Gm45053-201ENSMUST00000206112 2499 ntBASIC13.84□□□□□ -0.19
Hoxa2P31245 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Hoxa2P31245 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Hoxa2P31245 AC140393.3-201ENSMUST00000228396 1352 ntBASIC13.83□□□□□ -0.19
Hoxa2P31245 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
Hoxa2P31245 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC13.83□□□□□ -0.19
Hoxa2P31245 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Hoxa2P31245 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.19
Hoxa2P31245 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.19
Hoxa2P31245 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Hoxa2P31245 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC13.83□□□□□ -0.2
Hoxa2P31245 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Hoxa2P31245 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Hoxa2P31245 Gm14417-201ENSMUST00000120036 1074 ntBASIC13.83□□□□□ -0.2
Hoxa2P31245 Gm15937-201ENSMUST00000120727 1235 ntBASIC13.83□□□□□ -0.2
Hoxa2P31245 2700069I18Rik-201ENSMUST00000128815 1020 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Hoxa2P31245 2610001J05Rik-202ENSMUST00000155856 1077 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Hoxa2P31245 Gm6182-201ENSMUST00000156439 1208 ntBASIC13.83□□□□□ -0.2
Hoxa2P31245 4930599A14Rik-201ENSMUST00000186724 387 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Hoxa2P31245 Gm18752-202ENSMUST00000193627 587 ntTSL 3 BASIC13.83□□□□□ -0.2
Hoxa2P31245 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC13.83□□□□□ -0.2
Hoxa2P31245 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC13.83□□□□□ -0.2
Hoxa2P31245 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Hoxa2P31245 Gm7390-201ENSMUST00000212452 1216 ntBASIC13.83□□□□□ -0.2
Hoxa2P31245 Gm5425-201ENSMUST00000214125 459 ntBASIC13.83□□□□□ -0.2
Hoxa2P31245 Gm6653-201ENSMUST00000218063 1288 ntBASIC13.83□□□□□ -0.2
Hoxa2P31245 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Hoxa2P31245 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
Hoxa2P31245 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Hoxa2P31245 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC13.83□□□□□ -0.2
Hoxa2P31245 Olfr1277-201ENSMUST00000099619 962 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
Hoxa2P31245 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC13.83□□□□□ -0.2
Hoxa2P31245 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Hoxa2P31245 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Hoxa2P31245 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Hoxa2P31245 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Hoxa2P31245 E2f3-201ENSMUST00000102948 5097 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Hoxa2P31245 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Hoxa2P31245 Elk3-204ENSMUST00000151153 1336 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Hoxa2P31245 Gm7171-201ENSMUST00000177413 1349 ntBASIC13.83□□□□□ -0.2
Hoxa2P31245 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Hoxa2P31245 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Hoxa2P31245 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Hoxa2P31245 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Hoxa2P31245 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Hoxa2P31245 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Hoxa2P31245 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Hoxa2P31245 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Hoxa2P31245 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC13.82□□□□□ -0.2
Hoxa2P31245 Ccdc32-201ENSMUST00000036470 1870 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Hoxa2P31245 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC13.82□□□□□ -0.2
Hoxa2P31245 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Hoxa2P31245 Gm20541-201ENSMUST00000173035 1406 ntBASIC13.82□□□□□ -0.2
Hoxa2P31245 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC13.82□□□□□ -0.2
Hoxa2P31245 Gm38391-201ENSMUST00000191720 4069 ntBASIC13.82□□□□□ -0.2
Hoxa2P31245 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Hoxa2P31245 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Hoxa2P31245 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Hoxa2P31245 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms