Protein–RNA interactions for Protein: P25799

Nfkb1, Nuclear factor NF-kappa-B p105 subunit, mousemouse

Predictions only

Length 971 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nfkb1P25799 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nfkb1P25799 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nfkb1P25799 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC14.07□□□□□ -0.16
Nfkb1P25799 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nfkb1P25799 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC14.07□□□□□ -0.16
Nfkb1P25799 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC14.07□□□□□ -0.16
Nfkb1P25799 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nfkb1P25799 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nfkb1P25799 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nfkb1P25799 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nfkb1P25799 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nfkb1P25799 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Nfkb1P25799 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC14.07□□□□□ -0.16
Nfkb1P25799 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC14.07□□□□□ -0.16
Nfkb1P25799 Camp-201ENSMUST00000112022 758 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nfkb1P25799 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nfkb1P25799 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nfkb1P25799 Gm16342-201ENSMUST00000124025 1025 ntBASIC14.07□□□□□ -0.16
Nfkb1P25799 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Nfkb1P25799 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC14.07□□□□□ -0.16
Nfkb1P25799 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC14.07□□□□□ -0.16
Nfkb1P25799 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC14.07□□□□□ -0.16
Nfkb1P25799 Gm17794-201ENSMUST00000220252 955 ntBASIC14.07□□□□□ -0.16
Nfkb1P25799 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nfkb1P25799 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nfkb1P25799 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nfkb1P25799 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Nfkb1P25799 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nfkb1P25799 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Nfkb1P25799 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nfkb1P25799 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nfkb1P25799 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Nfkb1P25799 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nfkb1P25799 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nfkb1P25799 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nfkb1P25799 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nfkb1P25799 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nfkb1P25799 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC14.07□□□□□ -0.16
Nfkb1P25799 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nfkb1P25799 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nfkb1P25799 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nfkb1P25799 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nfkb1P25799 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Nfkb1P25799 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nfkb1P25799 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nfkb1P25799 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nfkb1P25799 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC14.06□□□□□ -0.16
Nfkb1P25799 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC14.06□□□□□ -0.16
Nfkb1P25799 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Nfkb1P25799 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC14.06□□□□□ -0.16
Nfkb1P25799 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC14.06□□□□□ -0.16
Nfkb1P25799 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC14.06□□□□□ -0.16
Nfkb1P25799 Gm5276-201ENSMUST00000196683 1047 ntBASIC14.06□□□□□ -0.16
Nfkb1P25799 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Nfkb1P25799 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC14.06□□□□□ -0.16
Nfkb1P25799 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nfkb1P25799 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nfkb1P25799 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Nfkb1P25799 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Nfkb1P25799 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Nfkb1P25799 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
Nfkb1P25799 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC14.06□□□□□ -0.16
Nfkb1P25799 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nfkb1P25799 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nfkb1P25799 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC14.06□□□□□ -0.16
Nfkb1P25799 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Nfkb1P25799 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Nfkb1P25799 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nfkb1P25799 Zkscan14-203ENSMUST00000198959 2243 ntBASIC14.06□□□□□ -0.16
Nfkb1P25799 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Nfkb1P25799 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
Nfkb1P25799 Gm21451-201ENSMUST00000111062 2775 ntBASIC14.05□□□□□ -0.16
Nfkb1P25799 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Nfkb1P25799 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Nfkb1P25799 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Nfkb1P25799 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Nfkb1P25799 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Nfkb1P25799 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Nfkb1P25799 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC14.05□□□□□ -0.16
Nfkb1P25799 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Nfkb1P25799 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Nfkb1P25799 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC14.05□□□□□ -0.16
Nfkb1P25799 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC14.05□□□□□ -0.16
Nfkb1P25799 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC14.05□□□□□ -0.16
Nfkb1P25799 5830487J09Rik-201ENSMUST00000198600 1256 ntTSL 5 BASIC14.05□□□□□ -0.16
Nfkb1P25799 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Nfkb1P25799 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Nfkb1P25799 Gm6983-201ENSMUST00000214912 628 ntBASIC14.05□□□□□ -0.16
Nfkb1P25799 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC14.05□□□□□ -0.16
Nfkb1P25799 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Nfkb1P25799 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Nfkb1P25799 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Nfkb1P25799 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
Nfkb1P25799 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Nfkb1P25799 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Nfkb1P25799 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Nfkb1P25799 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Nfkb1P25799 Gm12020-201ENSMUST00000119030 2042 ntBASIC14.05□□□□□ -0.16
Nfkb1P25799 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Nfkb1P25799 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 47.6 ms