Protein–RNA interactions for Protein: P25318

Col8a2, Collagen alpha-2(VIII) chain, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a2P25318 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Col8a2P25318 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Col8a2P25318 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Col8a2P25318 Cdk7-205ENSMUST00000225990 1159 ntBASIC11.43□□□□□ -0.58
Col8a2P25318 AC155252.1-201ENSMUST00000226462 1208 ntBASIC11.43□□□□□ -0.58
Col8a2P25318 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Col8a2P25318 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC11.43□□□□□ -0.58
Col8a2P25318 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Col8a2P25318 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Col8a2P25318 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC11.43□□□□□ -0.58
Col8a2P25318 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Col8a2P25318 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Col8a2P25318 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC11.43□□□□□ -0.58
Col8a2P25318 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Col8a2P25318 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC11.43□□□□□ -0.58
Col8a2P25318 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
Col8a2P25318 Gm13859-201ENSMUST00000119936 1423 ntBASIC11.43□□□□□ -0.58
Col8a2P25318 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC11.43□□□□□ -0.58
Col8a2P25318 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Col8a2P25318 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Col8a2P25318 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Col8a2P25318 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Col8a2P25318 Gm44291-201ENSMUST00000203102 2865 ntBASIC11.42□□□□□ -0.58
Col8a2P25318 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Col8a2P25318 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Col8a2P25318 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Col8a2P25318 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Col8a2P25318 Gm8775-201ENSMUST00000170943 1327 ntBASIC11.42□□□□□ -0.58
Col8a2P25318 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Col8a2P25318 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Col8a2P25318 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Col8a2P25318 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC11.42□□□□□ -0.58
Col8a2P25318 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Col8a2P25318 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Col8a2P25318 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Col8a2P25318 AC167013.2-201ENSMUST00000228520 2684 ntBASIC11.42□□□□□ -0.58
Col8a2P25318 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Col8a2P25318 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Col8a2P25318 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC11.42□□□□□ -0.58
Col8a2P25318 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC11.42□□□□□ -0.58
Col8a2P25318 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC11.42□□□□□ -0.58
Col8a2P25318 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Col8a2P25318 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
Col8a2P25318 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Col8a2P25318 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Col8a2P25318 Gm5069-202ENSMUST00000192714 1011 ntBASIC11.42□□□□□ -0.58
Col8a2P25318 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC11.42□□□□□ -0.58
Col8a2P25318 Gm7067-201ENSMUST00000207698 1249 ntBASIC11.42□□□□□ -0.58
Col8a2P25318 Gm5035-201ENSMUST00000215581 927 ntBASIC11.42□□□□□ -0.58
Col8a2P25318 AC155258.1-201ENSMUST00000219303 253 ntBASIC11.42□□□□□ -0.58
Col8a2P25318 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC11.42□□□□□ -0.58
Col8a2P25318 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Col8a2P25318 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Col8a2P25318 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Col8a2P25318 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Col8a2P25318 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC11.42□□□□□ -0.58
Col8a2P25318 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Col8a2P25318 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Col8a2P25318 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Col8a2P25318 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Col8a2P25318 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Col8a2P25318 AC159649.2-201ENSMUST00000222984 3223 ntBASIC11.42□□□□□ -0.58
Col8a2P25318 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Col8a2P25318 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Col8a2P25318 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Col8a2P25318 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Col8a2P25318 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC11.42□□□□□ -0.58
Col8a2P25318 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC11.42□□□□□ -0.58
Col8a2P25318 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Col8a2P25318 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Col8a2P25318 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Col8a2P25318 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Col8a2P25318 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
Col8a2P25318 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Col8a2P25318 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC11.42□□□□□ -0.58
Col8a2P25318 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC11.41□□□□□ -0.58
Col8a2P25318 Gm45760-201ENSMUST00000212190 1782 ntBASIC11.41□□□□□ -0.58
Col8a2P25318 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Col8a2P25318 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Col8a2P25318 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Col8a2P25318 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Col8a2P25318 Gm15222-202ENSMUST00000228667 1726 ntBASIC11.41□□□□□ -0.58
Col8a2P25318 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Col8a2P25318 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Col8a2P25318 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC11.41□□□□□ -0.58
Col8a2P25318 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Col8a2P25318 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Col8a2P25318 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Col8a2P25318 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Col8a2P25318 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Col8a2P25318 Gm12416-201ENSMUST00000120911 1008 ntBASIC11.41□□□□□ -0.58
Col8a2P25318 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC11.41□□□□□ -0.58
Col8a2P25318 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Col8a2P25318 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Col8a2P25318 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC11.41□□□□□ -0.58
Col8a2P25318 Gm27701-201ENSMUST00000184498 110 ntBASIC11.41□□□□□ -0.58
Col8a2P25318 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Col8a2P25318 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC11.41□□□□□ -0.58
Col8a2P25318 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Col8a2P25318 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 61.6 ms