Protein–RNA interactions for Protein: P22518

Clk1, Dual specificity protein kinase CLK1, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clk1P22518 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Clk1P22518 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Clk1P22518 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Clk1P22518 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Clk1P22518 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Clk1P22518 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Clk1P22518 E030026E10Rik-201ENSMUST00000200395 2217 ntBASIC12.82□□□□□ -0.36
Clk1P22518 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Clk1P22518 Thy1-201ENSMUST00000114840 1735 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
Clk1P22518 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Clk1P22518 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC12.82□□□□□ -0.36
Clk1P22518 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Clk1P22518 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Clk1P22518 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Clk1P22518 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC12.82□□□□□ -0.36
Clk1P22518 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Clk1P22518 A130077B15Rik-201ENSMUST00000219429 2547 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Clk1P22518 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Clk1P22518 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Clk1P22518 Gm15920-201ENSMUST00000118998 402 ntBASIC12.82□□□□□ -0.36
Clk1P22518 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC12.82□□□□□ -0.36
Clk1P22518 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Clk1P22518 Gm27533-201ENSMUST00000183800 152 ntBASIC12.82□□□□□ -0.36
Clk1P22518 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Clk1P22518 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Clk1P22518 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Clk1P22518 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Clk1P22518 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Clk1P22518 Gm5867-201ENSMUST00000063197 592 ntBASIC12.82□□□□□ -0.36
Clk1P22518 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Clk1P22518 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Clk1P22518 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Clk1P22518 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC12.82□□□□□ -0.36
Clk1P22518 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Clk1P22518 Gm5608-201ENSMUST00000210253 2290 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Clk1P22518 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Clk1P22518 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Clk1P22518 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Clk1P22518 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Clk1P22518 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Clk1P22518 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Clk1P22518 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC12.82□□□□□ -0.36
Clk1P22518 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Clk1P22518 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Clk1P22518 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC12.81□□□□□ -0.36
Clk1P22518 AC126549.2-201ENSMUST00000223997 1976 ntBASIC12.81□□□□□ -0.36
Clk1P22518 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Clk1P22518 CT025678.1-201ENSMUST00000214795 2972 ntBASIC12.81□□□□□ -0.36
Clk1P22518 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC12.81□□□□□ -0.36
Clk1P22518 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Clk1P22518 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Clk1P22518 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Clk1P22518 Prkcg-201ENSMUST00000100301 3127 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Clk1P22518 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Clk1P22518 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Clk1P22518 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Clk1P22518 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Clk1P22518 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Clk1P22518 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC12.81□□□□□ -0.36
Clk1P22518 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Clk1P22518 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC12.81□□□□□ -0.36
Clk1P22518 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC12.81□□□□□ -0.36
Clk1P22518 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC12.81□□□□□ -0.36
Clk1P22518 Ighv1-25-201ENSMUST00000195638 345 ntBASIC12.81□□□□□ -0.36
Clk1P22518 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Clk1P22518 Gm44872-201ENSMUST00000207864 420 ntBASIC12.81□□□□□ -0.36
Clk1P22518 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC12.81□□□□□ -0.36
Clk1P22518 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Clk1P22518 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Clk1P22518 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Clk1P22518 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Clk1P22518 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Clk1P22518 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Clk1P22518 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Clk1P22518 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Clk1P22518 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Clk1P22518 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Clk1P22518 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Clk1P22518 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Clk1P22518 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Clk1P22518 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Clk1P22518 Slx4ip-206ENSMUST00000180277 2723 ntAPPRIS P1 TSL 3 BASIC12.81□□□□□ -0.36
Clk1P22518 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Clk1P22518 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Clk1P22518 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Clk1P22518 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Clk1P22518 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Clk1P22518 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Clk1P22518 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Clk1P22518 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Clk1P22518 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Clk1P22518 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Clk1P22518 Vipas39-203ENSMUST00000179379 2418 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Clk1P22518 AC124577.2-201ENSMUST00000217413 2420 ntBASIC12.8□□□□□ -0.36
Clk1P22518 Chmp3-201ENSMUST00000059462 2654 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Clk1P22518 Ocln-203ENSMUST00000159459 1950 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Clk1P22518 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Clk1P22518 Lnx1-202ENSMUST00000087161 2753 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Clk1P22518 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC12.8□□□□□ -0.36
Clk1P22518 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 42.4 ms