Protein–RNA interactions for Protein: P20334

Tnfrsf9, Tumor necrosis factor receptor superfamily member 9, mousemouse

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf9P20334 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Tnfrsf9P20334 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC11.3□□□□□ -0.6
Tnfrsf9P20334 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC11.3□□□□□ -0.6
Tnfrsf9P20334 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Tnfrsf9P20334 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Tnfrsf9P20334 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Tnfrsf9P20334 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Tnfrsf9P20334 Calcoco1-204ENSMUST00000171838 2968 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Tnfrsf9P20334 Gm44913-201ENSMUST00000208060 2990 ntBASIC11.3□□□□□ -0.6
Tnfrsf9P20334 Asphd2-201ENSMUST00000031291 2678 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Tnfrsf9P20334 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Tnfrsf9P20334 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Tnfrsf9P20334 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Tnfrsf9P20334 Tceal8-204ENSMUST00000163584 2358 ntAPPRIS P1 TSL 3 BASIC11.3□□□□□ -0.6
Tnfrsf9P20334 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Tnfrsf9P20334 Hdc-201ENSMUST00000028838 2392 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Tnfrsf9P20334 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Tnfrsf9P20334 Apoo-204ENSMUST00000113898 784 ntAPPRIS P1 TSL 3 BASIC11.3□□□□□ -0.6
Tnfrsf9P20334 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC11.3□□□□□ -0.6
Tnfrsf9P20334 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC11.3□□□□□ -0.6
Tnfrsf9P20334 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC11.3□□□□□ -0.6
Tnfrsf9P20334 Gm17150-201ENSMUST00000165577 381 ntBASIC11.3□□□□□ -0.6
Tnfrsf9P20334 Mir6392-201ENSMUST00000184924 108 ntBASIC11.3□□□□□ -0.6
Tnfrsf9P20334 Gm27892-201ENSMUST00000185017 106 ntBASIC11.3□□□□□ -0.6
Tnfrsf9P20334 Gm28760-201ENSMUST00000185995 736 ntBASIC11.3□□□□□ -0.6
Tnfrsf9P20334 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC11.3□□□□□ -0.6
Tnfrsf9P20334 Gm18624-201ENSMUST00000220966 658 ntBASIC11.3□□□□□ -0.6
Tnfrsf9P20334 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC11.3□□□□□ -0.6
Tnfrsf9P20334 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Tnfrsf9P20334 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
Tnfrsf9P20334 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC11.3□□□□□ -0.6
Tnfrsf9P20334 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Tnfrsf9P20334 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Tnfrsf9P20334 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Tnfrsf9P20334 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Tnfrsf9P20334 Pygo2-202ENSMUST00000107413 2911 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Tnfrsf9P20334 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC11.3□□□□□ -0.6
Tnfrsf9P20334 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Tnfrsf9P20334 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Tnfrsf9P20334 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
Tnfrsf9P20334 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Tnfrsf9P20334 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC11.3□□□□□ -0.6
Tnfrsf9P20334 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Tnfrsf9P20334 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Tnfrsf9P20334 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Tnfrsf9P20334 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Tnfrsf9P20334 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Tnfrsf9P20334 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Tnfrsf9P20334 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Tnfrsf9P20334 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Tnfrsf9P20334 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Tnfrsf9P20334 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Tnfrsf9P20334 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Tnfrsf9P20334 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Tnfrsf9P20334 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC11.3□□□□□ -0.6
Tnfrsf9P20334 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Tnfrsf9P20334 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Tnfrsf9P20334 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Tnfrsf9P20334 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Tnfrsf9P20334 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Tnfrsf9P20334 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Tnfrsf9P20334 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Tnfrsf9P20334 Pabpc4-202ENSMUST00000080178 3019 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Tnfrsf9P20334 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Tnfrsf9P20334 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC11.29□□□□□ -0.6
Tnfrsf9P20334 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Tnfrsf9P20334 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC11.29□□□□□ -0.6
Tnfrsf9P20334 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC11.29□□□□□ -0.6
Tnfrsf9P20334 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC11.29□□□□□ -0.6
Tnfrsf9P20334 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC11.29□□□□□ -0.6
Tnfrsf9P20334 Olfr455-201ENSMUST00000171307 954 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
Tnfrsf9P20334 Gm3436-201ENSMUST00000179930 840 ntBASIC11.29□□□□□ -0.6
Tnfrsf9P20334 Gm16973-201ENSMUST00000180682 1299 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Tnfrsf9P20334 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC11.29□□□□□ -0.6
Tnfrsf9P20334 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC11.29□□□□□ -0.6
Tnfrsf9P20334 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Tnfrsf9P20334 Gm9803-202ENSMUST00000216543 456 ntTSL 5 BASIC11.29□□□□□ -0.6
Tnfrsf9P20334 Gm40645-202ENSMUST00000219828 874 ntTSL 5 BASIC11.29□□□□□ -0.6
Tnfrsf9P20334 Gm16476-201ENSMUST00000221544 139 ntBASIC11.29□□□□□ -0.6
Tnfrsf9P20334 Pinx1-201ENSMUST00000022528 1295 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Tnfrsf9P20334 AC159006.1-201ENSMUST00000226396 258 ntBASIC11.29□□□□□ -0.6
Tnfrsf9P20334 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Tnfrsf9P20334 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Tnfrsf9P20334 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Tnfrsf9P20334 Gm9797-201ENSMUST00000052902 613 ntBASIC11.29□□□□□ -0.6
Tnfrsf9P20334 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Tnfrsf9P20334 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Tnfrsf9P20334 Olfr293-201ENSMUST00000081474 1011 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
Tnfrsf9P20334 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Tnfrsf9P20334 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Tnfrsf9P20334 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Tnfrsf9P20334 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Tnfrsf9P20334 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC11.29□□□□□ -0.6
Tnfrsf9P20334 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Tnfrsf9P20334 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Tnfrsf9P20334 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Tnfrsf9P20334 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC11.29□□□□□ -0.6
Tnfrsf9P20334 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Tnfrsf9P20334 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC11.29□□□□□ -0.6
Tnfrsf9P20334 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms