Protein–RNA interactions for Protein: P18608

Hmgn1, Non-histone chromosomal protein HMG-14, mousemouse

Known RBP Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgn1P18608 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Hmgn1P18608 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hmgn1P18608 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hmgn1P18608 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hmgn1P18608 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Hmgn1P18608 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hmgn1P18608 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Hmgn1P18608 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC12.53□□□□□ -0.4
Hmgn1P18608 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Hmgn1P18608 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC12.53□□□□□ -0.4
Hmgn1P18608 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hmgn1P18608 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Hmgn1P18608 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hmgn1P18608 Gm27631-201ENSMUST00000184163 466 ntBASIC12.53□□□□□ -0.4
Hmgn1P18608 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hmgn1P18608 Gm4782-201ENSMUST00000168705 2046 ntBASIC12.53□□□□□ -0.4
Hmgn1P18608 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hmgn1P18608 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Hmgn1P18608 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Hmgn1P18608 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hmgn1P18608 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hmgn1P18608 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC12.53□□□□□ -0.4
Hmgn1P18608 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Hmgn1P18608 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hmgn1P18608 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC12.53□□□□□ -0.4
Hmgn1P18608 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hmgn1P18608 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hmgn1P18608 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Hmgn1P18608 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hmgn1P18608 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC12.52□□□□□ -0.4
Hmgn1P18608 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Hmgn1P18608 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC12.52□□□□□ -0.4
Hmgn1P18608 Gm43423-201ENSMUST00000198390 2094 ntBASIC12.52□□□□□ -0.4
Hmgn1P18608 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Hmgn1P18608 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Hmgn1P18608 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Hmgn1P18608 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Hmgn1P18608 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Hmgn1P18608 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Hmgn1P18608 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC12.52□□□□□ -0.41
Hmgn1P18608 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Hmgn1P18608 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC12.52□□□□□ -0.41
Hmgn1P18608 Gm17271-201ENSMUST00000165535 355 ntBASIC12.52□□□□□ -0.41
Hmgn1P18608 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC12.52□□□□□ -0.41
Hmgn1P18608 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
Hmgn1P18608 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC12.52□□□□□ -0.41
Hmgn1P18608 Ighv1-51-201ENSMUST00000192903 354 ntBASIC12.52□□□□□ -0.41
Hmgn1P18608 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC12.52□□□□□ -0.41
Hmgn1P18608 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC12.52□□□□□ -0.41
Hmgn1P18608 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC12.52□□□□□ -0.41
Hmgn1P18608 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC12.52□□□□□ -0.41
Hmgn1P18608 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Hmgn1P18608 Gm45612-201ENSMUST00000211320 160 ntBASIC12.52□□□□□ -0.41
Hmgn1P18608 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Hmgn1P18608 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Hmgn1P18608 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Hmgn1P18608 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Hmgn1P18608 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC12.52□□□□□ -0.41
Hmgn1P18608 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Hmgn1P18608 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Hmgn1P18608 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Hmgn1P18608 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Hmgn1P18608 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Hmgn1P18608 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Hmgn1P18608 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Hmgn1P18608 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Hmgn1P18608 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC12.52□□□□□ -0.41
Hmgn1P18608 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Hmgn1P18608 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Hmgn1P18608 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Hmgn1P18608 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Hmgn1P18608 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Hmgn1P18608 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Hmgn1P18608 Olfr607-202ENSMUST00000214347 5706 ntAPPRIS P5 TSL 5 BASIC12.51□□□□□ -0.41
Hmgn1P18608 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Hmgn1P18608 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Hmgn1P18608 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Hmgn1P18608 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Hmgn1P18608 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Hmgn1P18608 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Hmgn1P18608 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC12.51□□□□□ -0.41
Hmgn1P18608 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Hmgn1P18608 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC12.51□□□□□ -0.41
Hmgn1P18608 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
Hmgn1P18608 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Hmgn1P18608 Gm18733-201ENSMUST00000173950 856 ntBASIC12.51□□□□□ -0.41
Hmgn1P18608 Gm8116-201ENSMUST00000182917 1201 ntBASIC12.51□□□□□ -0.41
Hmgn1P18608 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Hmgn1P18608 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Hmgn1P18608 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC12.51□□□□□ -0.41
Hmgn1P18608 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Hmgn1P18608 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Hmgn1P18608 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC12.51□□□□□ -0.41
Hmgn1P18608 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Hmgn1P18608 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Hmgn1P18608 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Hmgn1P18608 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Hmgn1P18608 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Hmgn1P18608 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Hmgn1P18608 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms