Protein–RNA interactions for Protein: P02463

Col4a1, Collagen alpha-1(IV) chain, mousemouse

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a1P02463 Morn2-202ENSMUST00000227729 656 ntBASIC16.5■□□□□ 0.23
Col4a1P02463 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Col4a1P02463 Gpihbp1-203ENSMUST00000189874 1652 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Col4a1P02463 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Col4a1P02463 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Col4a1P02463 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Col4a1P02463 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
Col4a1P02463 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Col4a1P02463 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Col4a1P02463 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Col4a1P02463 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Col4a1P02463 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Col4a1P02463 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC16.5■□□□□ 0.23
Col4a1P02463 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Col4a1P02463 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Col4a1P02463 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Col4a1P02463 AC101945.2-201ENSMUST00000227886 1377 ntBASIC16.5■□□□□ 0.23
Col4a1P02463 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC16.5■□□□□ 0.23
Col4a1P02463 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC16.5■□□□□ 0.23
Col4a1P02463 Etfrf1-202ENSMUST00000111719 968 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Col4a1P02463 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC16.5■□□□□ 0.23
Col4a1P02463 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Col4a1P02463 AI480526-203ENSMUST00000160099 1017 ntTSL 2 BASIC16.5■□□□□ 0.23
Col4a1P02463 Gm8738-201ENSMUST00000172606 329 ntBASIC16.5■□□□□ 0.23
Col4a1P02463 Lsm2-207ENSMUST00000173004 870 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Col4a1P02463 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC16.5■□□□□ 0.23
Col4a1P02463 Tm2d2-202ENSMUST00000210536 727 ntTSL 3 BASIC16.5■□□□□ 0.23
Col4a1P02463 Ldha-213ENSMUST00000210631 685 ntTSL 5 BASIC16.5■□□□□ 0.23
Col4a1P02463 AC069562.3-201ENSMUST00000225387 587 ntBASIC16.5■□□□□ 0.23
Col4a1P02463 Saa3-201ENSMUST00000006956 555 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Col4a1P02463 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
Col4a1P02463 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Col4a1P02463 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Col4a1P02463 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Col4a1P02463 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Col4a1P02463 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Col4a1P02463 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Col4a1P02463 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Col4a1P02463 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Col4a1P02463 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
Col4a1P02463 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Col4a1P02463 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC16.49■□□□□ 0.23
Col4a1P02463 Mir877-201ENSMUST00000104738 85 ntBASIC16.49■□□□□ 0.23
Col4a1P02463 Gng7-205ENSMUST00000118465 875 ntAPPRIS ALT1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Col4a1P02463 Gm11964-201ENSMUST00000120982 444 ntBASIC16.49■□□□□ 0.23
Col4a1P02463 C030047K22Rik-201ENSMUST00000150382 1164 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Col4a1P02463 Iqcf6-201ENSMUST00000171091 537 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Col4a1P02463 Gm2383-201ENSMUST00000181461 807 ntBASIC16.49■□□□□ 0.23
Col4a1P02463 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC16.49■□□□□ 0.23
Col4a1P02463 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Col4a1P02463 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Col4a1P02463 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC16.49■□□□□ 0.23
Col4a1P02463 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Col4a1P02463 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Col4a1P02463 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Col4a1P02463 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Col4a1P02463 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Col4a1P02463 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Col4a1P02463 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Col4a1P02463 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Col4a1P02463 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Col4a1P02463 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Col4a1P02463 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC16.48■□□□□ 0.23
Col4a1P02463 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Col4a1P02463 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Col4a1P02463 4933424N20Rik-201ENSMUST00000200749 1463 ntBASIC16.48■□□□□ 0.23
Col4a1P02463 AC154725.1-201ENSMUST00000224826 1961 ntBASIC16.48■□□□□ 0.23
Col4a1P02463 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Col4a1P02463 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC16.48■□□□□ 0.23
Col4a1P02463 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
Col4a1P02463 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
Col4a1P02463 Gm14704-201ENSMUST00000120300 874 ntBASIC16.48■□□□□ 0.23
Col4a1P02463 Gm12539-201ENSMUST00000121549 1098 ntBASIC16.48■□□□□ 0.23
Col4a1P02463 Olfr668-201ENSMUST00000164391 957 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
Col4a1P02463 Gm17586-201ENSMUST00000181502 908 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Col4a1P02463 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
Col4a1P02463 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Col4a1P02463 Rnf7-201ENSMUST00000057500 1232 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Col4a1P02463 Olfr667-201ENSMUST00000071362 981 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
Col4a1P02463 Olfr666-201ENSMUST00000081116 957 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
Col4a1P02463 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
Col4a1P02463 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Col4a1P02463 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC16.48■□□□□ 0.23
Col4a1P02463 Gm10676-201ENSMUST00000098778 3221 ntBASIC16.48■□□□□ 0.23
Col4a1P02463 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC16.48■□□□□ 0.23
Col4a1P02463 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Col4a1P02463 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
Col4a1P02463 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Col4a1P02463 Skp2-203ENSMUST00000190131 1819 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Col4a1P02463 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Col4a1P02463 Lrrfip2-214ENSMUST00000217117 1363 ntTSL 5 BASIC16.47■□□□□ 0.23
Col4a1P02463 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Col4a1P02463 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
Col4a1P02463 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Col4a1P02463 Gm38157-201ENSMUST00000194178 1698 ntBASIC16.47■□□□□ 0.23
Col4a1P02463 0610010K14Rik-203ENSMUST00000100950 545 ntTSL 2 BASIC16.47■□□□□ 0.23
Col4a1P02463 Eif3i-201ENSMUST00000102593 1123 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Col4a1P02463 Park7-202ENSMUST00000105673 919 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
Col4a1P02463 Gm12997-201ENSMUST00000120207 640 ntBASIC16.47■□□□□ 0.23
Col4a1P02463 Gm37466-201ENSMUST00000195692 652 ntBASIC16.47■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 41.1 ms