Protein–RNA interactions for Protein: O89116

Vti1a, Vesicle transport through interaction with t-SNAREs homolog 1A, mousemouse

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vti1aO89116 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC14.77□□□□□ -0.04
Vti1aO89116 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Vti1aO89116 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC14.77□□□□□ -0.04
Vti1aO89116 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Vti1aO89116 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Vti1aO89116 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
Vti1aO89116 AC114008.2-201ENSMUST00000227699 1347 ntBASIC14.77□□□□□ -0.04
Vti1aO89116 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Vti1aO89116 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Vti1aO89116 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Vti1aO89116 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Vti1aO89116 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC14.77□□□□□ -0.05
Vti1aO89116 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Vti1aO89116 Gm6244-201ENSMUST00000178732 841 ntBASIC14.77□□□□□ -0.05
Vti1aO89116 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC14.77□□□□□ -0.05
Vti1aO89116 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Vti1aO89116 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Vti1aO89116 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Vti1aO89116 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
Vti1aO89116 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Vti1aO89116 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Vti1aO89116 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
Vti1aO89116 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Vti1aO89116 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Vti1aO89116 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
Vti1aO89116 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Vti1aO89116 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
Vti1aO89116 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Vti1aO89116 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC14.77□□□□□ -0.05
Vti1aO89116 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Vti1aO89116 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Vti1aO89116 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Vti1aO89116 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Vti1aO89116 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Vti1aO89116 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Vti1aO89116 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Vti1aO89116 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC14.76□□□□□ -0.05
Vti1aO89116 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Vti1aO89116 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Vti1aO89116 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Vti1aO89116 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Vti1aO89116 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Vti1aO89116 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC14.76□□□□□ -0.05
Vti1aO89116 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
Vti1aO89116 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
Vti1aO89116 Mir1894-201ENSMUST00000122802 81 ntBASIC14.76□□□□□ -0.05
Vti1aO89116 Mir1982-201ENSMUST00000157368 74 ntBASIC14.76□□□□□ -0.05
Vti1aO89116 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Vti1aO89116 AY702102-202ENSMUST00000194651 1173 ntBASIC14.76□□□□□ -0.05
Vti1aO89116 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
Vti1aO89116 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC14.76□□□□□ -0.05
Vti1aO89116 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Vti1aO89116 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Vti1aO89116 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Vti1aO89116 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Vti1aO89116 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Vti1aO89116 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Vti1aO89116 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
Vti1aO89116 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Vti1aO89116 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC14.76□□□□□ -0.05
Vti1aO89116 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Vti1aO89116 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Vti1aO89116 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Vti1aO89116 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Vti1aO89116 AC121801.1-201ENSMUST00000225363 1899 ntBASIC14.76□□□□□ -0.05
Vti1aO89116 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
Vti1aO89116 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC14.76□□□□□ -0.05
Vti1aO89116 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Vti1aO89116 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC14.76□□□□□ -0.05
Vti1aO89116 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Vti1aO89116 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC14.75□□□□□ -0.05
Vti1aO89116 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Vti1aO89116 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Vti1aO89116 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Vti1aO89116 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Vti1aO89116 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Vti1aO89116 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
Vti1aO89116 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
Vti1aO89116 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Vti1aO89116 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Vti1aO89116 AC126549.2-201ENSMUST00000223997 1976 ntBASIC14.75□□□□□ -0.05
Vti1aO89116 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Vti1aO89116 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
Vti1aO89116 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
Vti1aO89116 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Vti1aO89116 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Vti1aO89116 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC14.75□□□□□ -0.05
Vti1aO89116 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Vti1aO89116 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Vti1aO89116 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC14.75□□□□□ -0.05
Vti1aO89116 Gm43630-201ENSMUST00000201550 776 ntBASIC14.75□□□□□ -0.05
Vti1aO89116 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Vti1aO89116 AC166349.1-201ENSMUST00000220866 695 ntBASIC14.75□□□□□ -0.05
Vti1aO89116 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Vti1aO89116 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Vti1aO89116 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Vti1aO89116 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC14.75□□□□□ -0.05
Vti1aO89116 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Vti1aO89116 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Vti1aO89116 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC14.75□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms