Protein–RNA interactions for Protein: O88545

Cops6, COP9 signalosome complex subunit 6, mousemouse

Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops6O88545 AC154319.1-201ENSMUST00000216330 312 ntBASIC16.65■□□□□ 0.26
Cops6O88545 AL589735.1-201ENSMUST00000224353 270 ntBASIC16.65■□□□□ 0.26
Cops6O88545 CT573086.1-201ENSMUST00000227202 1074 ntBASIC16.65■□□□□ 0.26
Cops6O88545 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cops6O88545 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cops6O88545 Olfr707-201ENSMUST00000088687 924 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Cops6O88545 Olfr1532-ps1-201ENSMUST00000098140 924 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Cops6O88545 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Cops6O88545 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC16.65■□□□□ 0.26
Cops6O88545 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC16.65■□□□□ 0.26
Cops6O88545 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cops6O88545 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cops6O88545 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC16.65■□□□□ 0.26
Cops6O88545 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC16.65■□□□□ 0.26
Cops6O88545 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cops6O88545 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Cops6O88545 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC16.65■□□□□ 0.26
Cops6O88545 Gm42853-201ENSMUST00000201273 1387 ntBASIC16.64■□□□□ 0.26
Cops6O88545 Nupl1-207ENSMUST00000225311 2475 ntBASIC16.64■□□□□ 0.26
Cops6O88545 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.26
Cops6O88545 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC16.64■□□□□ 0.26
Cops6O88545 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC16.64■□□□□ 0.25
Cops6O88545 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
Cops6O88545 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cops6O88545 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC16.64■□□□□ 0.25
Cops6O88545 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cops6O88545 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC16.64■□□□□ 0.25
Cops6O88545 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Cops6O88545 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC16.64■□□□□ 0.25
Cops6O88545 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Cops6O88545 Abhd14b-202ENSMUST00000185347 1200 ntAPPRIS P1 TSL 3 BASIC16.64■□□□□ 0.25
Cops6O88545 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC16.64■□□□□ 0.25
Cops6O88545 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC16.64■□□□□ 0.25
Cops6O88545 Net1-207ENSMUST00000223258 597 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Cops6O88545 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cops6O88545 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Cops6O88545 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cops6O88545 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cops6O88545 Gm45760-201ENSMUST00000212190 1782 ntBASIC16.64■□□□□ 0.25
Cops6O88545 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cops6O88545 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cops6O88545 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cops6O88545 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cops6O88545 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cops6O88545 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cops6O88545 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cops6O88545 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Cops6O88545 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Cops6O88545 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Cops6O88545 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cops6O88545 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Cops6O88545 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Cops6O88545 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cops6O88545 Agtpbp1-213ENSMUST00000167096 508 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Cops6O88545 Gm37497-201ENSMUST00000195830 798 ntBASIC16.63■□□□□ 0.25
Cops6O88545 Gm43755-201ENSMUST00000200001 408 ntTSL 5 BASIC16.63■□□□□ 0.25
Cops6O88545 Gm18054-201ENSMUST00000207539 555 ntBASIC16.63■□□□□ 0.25
Cops6O88545 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cops6O88545 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cops6O88545 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cops6O88545 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Cops6O88545 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cops6O88545 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cops6O88545 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cops6O88545 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Cops6O88545 Gm15544-201ENSMUST00000118776 1531 ntBASIC16.63■□□□□ 0.25
Cops6O88545 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cops6O88545 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cops6O88545 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cops6O88545 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cops6O88545 Gm12846-201ENSMUST00000120431 1373 ntBASIC16.63■□□□□ 0.25
Cops6O88545 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC16.63■□□□□ 0.25
Cops6O88545 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cops6O88545 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cops6O88545 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cops6O88545 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cops6O88545 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Cops6O88545 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Cops6O88545 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cops6O88545 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cops6O88545 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC16.62■□□□□ 0.25
Cops6O88545 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC16.62■□□□□ 0.25
Cops6O88545 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Cops6O88545 Spata3-202ENSMUST00000113344 1047 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cops6O88545 Gm15198-201ENSMUST00000117283 177 ntBASIC16.62■□□□□ 0.25
Cops6O88545 Nfu1-203ENSMUST00000120240 1195 ntAPPRIS P3 TSL 5 BASIC16.62■□□□□ 0.25
Cops6O88545 Gm36634-201ENSMUST00000218356 1259 ntTSL 3 BASIC16.62■□□□□ 0.25
Cops6O88545 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC16.62■□□□□ 0.25
Cops6O88545 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC16.62■□□□□ 0.25
Cops6O88545 Gm2824-203ENSMUST00000226189 1228 ntBASIC16.62■□□□□ 0.25
Cops6O88545 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cops6O88545 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cops6O88545 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cops6O88545 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cops6O88545 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cops6O88545 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cops6O88545 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cops6O88545 Gm11661-201ENSMUST00000121761 1327 ntBASIC16.62■□□□□ 0.25
Cops6O88545 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cops6O88545 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 25.6 ms