Protein–RNA interactions for Protein: O55057

Pde6d, Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta, mousemouse

Predictions only

Length 150 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6dO55057 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Pde6dO55057 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
Pde6dO55057 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Pde6dO55057 Gm27196-201ENSMUST00000184787 2582 ntBASIC10.8□□□□□ -0.68
Pde6dO55057 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Pde6dO55057 Gm7049-201ENSMUST00000223520 1712 ntBASIC10.8□□□□□ -0.68
Pde6dO55057 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Pde6dO55057 Dpyd-201ENSMUST00000039177 4492 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Pde6dO55057 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Pde6dO55057 Neurod6-201ENSMUST00000044767 2150 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Pde6dO55057 CT573086.2-201ENSMUST00000227277 4992 ntBASIC10.8□□□□□ -0.68
Pde6dO55057 Tbc1d1-202ENSMUST00000101195 5432 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
Pde6dO55057 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Pde6dO55057 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Pde6dO55057 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Pde6dO55057 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Pde6dO55057 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Pde6dO55057 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
Pde6dO55057 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Pde6dO55057 Mtus2-203ENSMUST00000085558 7543 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Pde6dO55057 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC10.79□□□□□ -0.68
Pde6dO55057 Tfb2m-201ENSMUST00000027769 2449 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Pde6dO55057 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
Pde6dO55057 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
Pde6dO55057 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Pde6dO55057 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC10.79□□□□□ -0.68
Pde6dO55057 Gm9195-201ENSMUST00000208955 8870 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
Pde6dO55057 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Pde6dO55057 Dmp1-201ENSMUST00000066708 2764 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Pde6dO55057 Ciz1-202ENSMUST00000113331 2604 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
Pde6dO55057 Gm4755-201ENSMUST00000181803 2647 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Pde6dO55057 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Pde6dO55057 Adam19-201ENSMUST00000011400 6383 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Pde6dO55057 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Pde6dO55057 Gm37269-201ENSMUST00000193906 1891 ntBASIC10.79□□□□□ -0.68
Pde6dO55057 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Pde6dO55057 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Pde6dO55057 Pcnx2-201ENSMUST00000047239 7236 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
Pde6dO55057 Rufy2-203ENSMUST00000122231 2664 ntTSL 5 BASIC10.79□□□□□ -0.68
Pde6dO55057 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
Pde6dO55057 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Pde6dO55057 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Pde6dO55057 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Pde6dO55057 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
Pde6dO55057 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Pde6dO55057 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Pde6dO55057 Otx2os1-206ENSMUST00000228153 787 ntBASIC10.79□□□□□ -0.68
Pde6dO55057 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Pde6dO55057 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC10.79□□□□□ -0.68
Pde6dO55057 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Pde6dO55057 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Pde6dO55057 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC10.79□□□□□ -0.68
Pde6dO55057 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Pde6dO55057 Epha5-202ENSMUST00000113398 4830 ntTSL 5 BASIC10.79□□□□□ -0.68
Pde6dO55057 Kcnj5-201ENSMUST00000034533 4685 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Pde6dO55057 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Pde6dO55057 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Pde6dO55057 Pik3r1-202ENSMUST00000055518 7113 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Pde6dO55057 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC10.79□□□□□ -0.68
Pde6dO55057 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Pde6dO55057 Sectm1b-201ENSMUST00000039309 2287 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Pde6dO55057 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Pde6dO55057 Rbm8a-206ENSMUST00000200647 2620 ntTSL 2 BASIC10.79□□□□□ -0.68
Pde6dO55057 Trim46-201ENSMUST00000041022 3122 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Pde6dO55057 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC10.79□□□□□ -0.68
Pde6dO55057 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
Pde6dO55057 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Pde6dO55057 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Pde6dO55057 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Pde6dO55057 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Pde6dO55057 Ints6-202ENSMUST00000223585 10883 ntAPPRIS P1 BASIC10.79□□□□□ -0.68
Pde6dO55057 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
Pde6dO55057 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
Pde6dO55057 AC164702.1-201ENSMUST00000220135 2212 ntBASIC10.78□□□□□ -0.68
Pde6dO55057 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC10.78□□□□□ -0.68
Pde6dO55057 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
Pde6dO55057 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
Pde6dO55057 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Pde6dO55057 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC10.78□□□□□ -0.68
Pde6dO55057 Ticrr-201ENSMUST00000035977 7199 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Pde6dO55057 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Pde6dO55057 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Pde6dO55057 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Pde6dO55057 Cramp1l-201ENSMUST00000073337 7517 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Pde6dO55057 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Pde6dO55057 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
Pde6dO55057 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC10.78□□□□□ -0.68
Pde6dO55057 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Pde6dO55057 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC10.78□□□□□ -0.68
Pde6dO55057 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Pde6dO55057 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC10.78□□□□□ -0.68
Pde6dO55057 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC10.78□□□□□ -0.68
Pde6dO55057 CT030704.2-201ENSMUST00000228887 494 ntBASIC10.78□□□□□ -0.68
Pde6dO55057 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Pde6dO55057 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Pde6dO55057 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Pde6dO55057 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Pde6dO55057 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Pde6dO55057 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Pde6dO55057 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC10.78□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms