Protein–RNA interactions for Protein: O54941

Smarce1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1, mousemouse

Known RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarce1O54941 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Smarce1O54941 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Smarce1O54941 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Smarce1O54941 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Smarce1O54941 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Smarce1O54941 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Smarce1O54941 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Smarce1O54941 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Smarce1O54941 Gm13730-201ENSMUST00000121036 1462 ntBASIC16.29■□□□□ 0.2
Smarce1O54941 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
Smarce1O54941 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Smarce1O54941 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Smarce1O54941 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Smarce1O54941 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Smarce1O54941 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Smarce1O54941 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Smarce1O54941 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Smarce1O54941 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Smarce1O54941 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC16.28■□□□□ 0.2
Smarce1O54941 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Smarce1O54941 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Smarce1O54941 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC16.28■□□□□ 0.2
Smarce1O54941 Gm15653-201ENSMUST00000119247 907 ntBASIC16.28■□□□□ 0.2
Smarce1O54941 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC16.28■□□□□ 0.2
Smarce1O54941 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC16.28■□□□□ 0.2
Smarce1O54941 Gm10253-201ENSMUST00000194270 940 ntBASIC16.28■□□□□ 0.2
Smarce1O54941 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Smarce1O54941 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Smarce1O54941 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Smarce1O54941 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Smarce1O54941 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Smarce1O54941 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Smarce1O54941 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Smarce1O54941 Gm12500-202ENSMUST00000186471 2428 ntBASIC16.28■□□□□ 0.2
Smarce1O54941 Gm42928-201ENSMUST00000197338 3339 ntBASIC16.28■□□□□ 0.2
Smarce1O54941 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Smarce1O54941 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Smarce1O54941 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Smarce1O54941 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC16.28■□□□□ 0.2
Smarce1O54941 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Smarce1O54941 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Smarce1O54941 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Smarce1O54941 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Smarce1O54941 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Smarce1O54941 AC154725.1-201ENSMUST00000224826 1961 ntBASIC16.27■□□□□ 0.2
Smarce1O54941 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Smarce1O54941 Gm37795-201ENSMUST00000194216 2459 ntBASIC16.27■□□□□ 0.2
Smarce1O54941 Gm37844-201ENSMUST00000192473 4097 ntBASIC16.27■□□□□ 0.2
Smarce1O54941 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Smarce1O54941 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
Smarce1O54941 Gm28386-201ENSMUST00000189147 1849 ntBASIC16.27■□□□□ 0.2
Smarce1O54941 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Smarce1O54941 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Smarce1O54941 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
Smarce1O54941 Gm12428-201ENSMUST00000119844 727 ntBASIC16.27■□□□□ 0.2
Smarce1O54941 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Smarce1O54941 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC16.27■□□□□ 0.2
Smarce1O54941 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Smarce1O54941 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC16.27■□□□□ 0.2
Smarce1O54941 Gm18934-201ENSMUST00000216671 1044 ntBASIC16.27■□□□□ 0.2
Smarce1O54941 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
Smarce1O54941 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Smarce1O54941 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC16.27■□□□□ 0.2
Smarce1O54941 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Smarce1O54941 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Smarce1O54941 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Smarce1O54941 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC16.27■□□□□ 0.2
Smarce1O54941 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Smarce1O54941 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Smarce1O54941 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
Smarce1O54941 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Smarce1O54941 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Smarce1O54941 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Smarce1O54941 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Smarce1O54941 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Smarce1O54941 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Smarce1O54941 Gm38094-201ENSMUST00000195864 2978 ntBASIC16.26■□□□□ 0.19
Smarce1O54941 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Smarce1O54941 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Smarce1O54941 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Smarce1O54941 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Smarce1O54941 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Smarce1O54941 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC16.26■□□□□ 0.19
Smarce1O54941 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
Smarce1O54941 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Smarce1O54941 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Smarce1O54941 Gm15460-201ENSMUST00000118147 391 ntBASIC16.26■□□□□ 0.19
Smarce1O54941 Gm21470-201ENSMUST00000187680 696 ntBASIC16.26■□□□□ 0.19
Smarce1O54941 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Smarce1O54941 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Smarce1O54941 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC16.26■□□□□ 0.19
Smarce1O54941 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Smarce1O54941 AC225888.1-201ENSMUST00000227184 728 ntBASIC16.26■□□□□ 0.19
Smarce1O54941 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Smarce1O54941 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Smarce1O54941 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Smarce1O54941 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Smarce1O54941 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Smarce1O54941 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Smarce1O54941 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 83.6 ms