Protein–RNA interactions for Protein: O35988

Sdc4, Syndecan-4, mousemouse

Known RBP Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc4O35988 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Sdc4O35988 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Sdc4O35988 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC14.09□□□□□ -0.15
Sdc4O35988 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Sdc4O35988 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Sdc4O35988 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Sdc4O35988 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Sdc4O35988 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Sdc4O35988 Gm13689-201ENSMUST00000119360 685 ntBASIC14.09□□□□□ -0.15
Sdc4O35988 Gm13829-201ENSMUST00000119600 138 ntBASIC14.09□□□□□ -0.15
Sdc4O35988 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
Sdc4O35988 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Sdc4O35988 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Sdc4O35988 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC14.09□□□□□ -0.15
Sdc4O35988 Gm42550-201ENSMUST00000201553 960 ntBASIC14.09□□□□□ -0.15
Sdc4O35988 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Sdc4O35988 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Sdc4O35988 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Sdc4O35988 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Sdc4O35988 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC14.09□□□□□ -0.15
Sdc4O35988 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Sdc4O35988 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Sdc4O35988 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Sdc4O35988 Gm28182-201ENSMUST00000188354 2477 ntBASIC14.09□□□□□ -0.15
Sdc4O35988 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Sdc4O35988 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Sdc4O35988 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Sdc4O35988 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Sdc4O35988 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Sdc4O35988 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC14.09□□□□□ -0.15
Sdc4O35988 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Sdc4O35988 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC14.09□□□□□ -0.15
Sdc4O35988 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Sdc4O35988 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Sdc4O35988 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Sdc4O35988 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Sdc4O35988 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Sdc4O35988 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.15
Sdc4O35988 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC14.08□□□□□ -0.15
Sdc4O35988 Gm5912-201ENSMUST00000122282 1438 ntBASIC14.08□□□□□ -0.15
Sdc4O35988 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Sdc4O35988 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Sdc4O35988 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Sdc4O35988 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC14.08□□□□□ -0.16
Sdc4O35988 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Sdc4O35988 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Sdc4O35988 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Sdc4O35988 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Sdc4O35988 Mup-ps23-201ENSMUST00000118063 630 ntBASIC14.08□□□□□ -0.16
Sdc4O35988 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Sdc4O35988 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Sdc4O35988 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Sdc4O35988 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC14.08□□□□□ -0.16
Sdc4O35988 Gm27486-201ENSMUST00000184923 80 ntBASIC14.08□□□□□ -0.16
Sdc4O35988 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Sdc4O35988 Gm6266-201ENSMUST00000203844 806 ntBASIC14.08□□□□□ -0.16
Sdc4O35988 AC110817.1-201ENSMUST00000225706 605 ntBASIC14.08□□□□□ -0.16
Sdc4O35988 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Sdc4O35988 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Sdc4O35988 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Sdc4O35988 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Sdc4O35988 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Sdc4O35988 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Sdc4O35988 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Sdc4O35988 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Sdc4O35988 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Sdc4O35988 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Sdc4O35988 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Sdc4O35988 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
Sdc4O35988 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Sdc4O35988 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Sdc4O35988 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Sdc4O35988 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Sdc4O35988 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Sdc4O35988 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC14.08□□□□□ -0.16
Sdc4O35988 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Sdc4O35988 Gm8337-201ENSMUST00000187358 1938 ntBASIC14.07□□□□□ -0.16
Sdc4O35988 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Sdc4O35988 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sdc4O35988 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Sdc4O35988 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sdc4O35988 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sdc4O35988 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sdc4O35988 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Sdc4O35988 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sdc4O35988 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sdc4O35988 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sdc4O35988 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC14.07□□□□□ -0.16
Sdc4O35988 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sdc4O35988 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sdc4O35988 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Sdc4O35988 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC14.07□□□□□ -0.16
Sdc4O35988 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC14.07□□□□□ -0.16
Sdc4O35988 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Sdc4O35988 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC14.07□□□□□ -0.16
Sdc4O35988 Gm45711-202ENSMUST00000164175 979 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Sdc4O35988 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Sdc4O35988 Gm27839-201ENSMUST00000184242 106 ntBASIC14.07□□□□□ -0.16
Sdc4O35988 Gm5276-201ENSMUST00000196683 1047 ntBASIC14.07□□□□□ -0.16
Sdc4O35988 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 37.8 ms