Protein–RNA interactions for Protein: O35393

Efnb3, Ephrin-B3, mousemouse

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Efnb3O35393 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Efnb3O35393 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Efnb3O35393 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Efnb3O35393 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Efnb3O35393 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
Efnb3O35393 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
Efnb3O35393 Ntrk2-204ENSMUST00000224259 3049 ntBASIC10.82□□□□□ -0.68
Efnb3O35393 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Efnb3O35393 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Efnb3O35393 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Efnb3O35393 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Efnb3O35393 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Efnb3O35393 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
Efnb3O35393 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC10.82□□□□□ -0.68
Efnb3O35393 Gm13730-201ENSMUST00000121036 1462 ntBASIC10.82□□□□□ -0.68
Efnb3O35393 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Efnb3O35393 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Efnb3O35393 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Efnb3O35393 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Efnb3O35393 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC10.82□□□□□ -0.68
Efnb3O35393 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
Efnb3O35393 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Efnb3O35393 Gm15427-201ENSMUST00000117288 531 ntBASIC10.82□□□□□ -0.68
Efnb3O35393 Gm11543-201ENSMUST00000120758 370 ntBASIC10.82□□□□□ -0.68
Efnb3O35393 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC10.82□□□□□ -0.68
Efnb3O35393 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC10.82□□□□□ -0.68
Efnb3O35393 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Efnb3O35393 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Efnb3O35393 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC10.82□□□□□ -0.68
Efnb3O35393 Gm43073-201ENSMUST00000198200 1189 ntBASIC10.82□□□□□ -0.68
Efnb3O35393 Bloc1s5-203ENSMUST00000224902 612 ntBASIC10.82□□□□□ -0.68
Efnb3O35393 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Efnb3O35393 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Efnb3O35393 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
Efnb3O35393 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Efnb3O35393 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Efnb3O35393 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Efnb3O35393 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC10.82□□□□□ -0.68
Efnb3O35393 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Efnb3O35393 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC10.82□□□□□ -0.68
Efnb3O35393 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC10.82□□□□□ -0.68
Efnb3O35393 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Efnb3O35393 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC10.82□□□□□ -0.68
Efnb3O35393 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Efnb3O35393 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Efnb3O35393 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Efnb3O35393 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Efnb3O35393 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Efnb3O35393 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC10.82□□□□□ -0.68
Efnb3O35393 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Efnb3O35393 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Efnb3O35393 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC10.81□□□□□ -0.68
Efnb3O35393 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Efnb3O35393 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Efnb3O35393 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Efnb3O35393 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Efnb3O35393 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Efnb3O35393 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Efnb3O35393 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Efnb3O35393 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC10.81□□□□□ -0.68
Efnb3O35393 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Efnb3O35393 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Efnb3O35393 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC10.81□□□□□ -0.68
Efnb3O35393 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Efnb3O35393 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC10.81□□□□□ -0.68
Efnb3O35393 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Efnb3O35393 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Efnb3O35393 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC10.81□□□□□ -0.68
Efnb3O35393 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
Efnb3O35393 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Efnb3O35393 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Efnb3O35393 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Efnb3O35393 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC10.81□□□□□ -0.68
Efnb3O35393 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Efnb3O35393 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Efnb3O35393 Gm3809-201ENSMUST00000180973 1006 ntBASIC10.81□□□□□ -0.68
Efnb3O35393 Gm17968-201ENSMUST00000194902 784 ntBASIC10.81□□□□□ -0.68
Efnb3O35393 Gm2756-201ENSMUST00000195851 400 ntBASIC10.81□□□□□ -0.68
Efnb3O35393 Gm44492-201ENSMUST00000197012 141 ntBASIC10.81□□□□□ -0.68
Efnb3O35393 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC10.81□□□□□ -0.68
Efnb3O35393 AC132104.2-201ENSMUST00000215011 266 ntBASIC10.81□□□□□ -0.68
Efnb3O35393 CT030684.1-201ENSMUST00000227292 914 ntBASIC10.81□□□□□ -0.68
Efnb3O35393 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Efnb3O35393 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Efnb3O35393 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Efnb3O35393 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Efnb3O35393 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Efnb3O35393 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC10.81□□□□□ -0.68
Efnb3O35393 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Efnb3O35393 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Efnb3O35393 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
Efnb3O35393 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC10.81□□□□□ -0.68
Efnb3O35393 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Efnb3O35393 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Efnb3O35393 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Efnb3O35393 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC10.81□□□□□ -0.68
Efnb3O35393 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC10.81□□□□□ -0.68
Efnb3O35393 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Efnb3O35393 Gm44891-201ENSMUST00000208817 2223 ntBASIC10.81□□□□□ -0.68
Efnb3O35393 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC10.81□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 23.1 ms