Protein–RNA interactions for Protein: O35206

Col15a1, Collagen alpha-1(XV) chain, mousemouse

Predictions only

Length 1,367 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col15a1O35206 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC17.36■□□□□ 0.37
Col15a1O35206 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Col15a1O35206 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Col15a1O35206 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Col15a1O35206 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Col15a1O35206 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Col15a1O35206 Gm27320-201ENSMUST00000184892 109 ntBASIC17.36■□□□□ 0.37
Col15a1O35206 Gm37489-201ENSMUST00000191883 159 ntBASIC17.36■□□□□ 0.37
Col15a1O35206 Caly-203ENSMUST00000211044 1029 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Col15a1O35206 Olfr223-201ENSMUST00000061293 1111 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Col15a1O35206 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Col15a1O35206 Gm44207-201ENSMUST00000204568 1424 ntBASIC17.36■□□□□ 0.37
Col15a1O35206 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Col15a1O35206 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Col15a1O35206 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Col15a1O35206 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Col15a1O35206 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Col15a1O35206 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Col15a1O35206 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Col15a1O35206 Gm7993-201ENSMUST00000200970 1384 ntBASIC17.35■□□□□ 0.37
Col15a1O35206 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Col15a1O35206 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Col15a1O35206 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Col15a1O35206 Gm16570-201ENSMUST00000161951 436 ntBASIC17.35■□□□□ 0.37
Col15a1O35206 Mir7070-201ENSMUST00000183657 86 ntBASIC17.35■□□□□ 0.37
Col15a1O35206 Gm4768-201ENSMUST00000206199 686 ntBASIC17.35■□□□□ 0.37
Col15a1O35206 Gm6082-201ENSMUST00000215204 454 ntBASIC17.35■□□□□ 0.37
Col15a1O35206 Gm9176-201ENSMUST00000219955 1120 ntBASIC17.35■□□□□ 0.37
Col15a1O35206 AC122371.3-201ENSMUST00000223402 1061 ntBASIC17.35■□□□□ 0.37
Col15a1O35206 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Col15a1O35206 Saa3-201ENSMUST00000006956 555 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Col15a1O35206 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Col15a1O35206 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Col15a1O35206 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Col15a1O35206 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Col15a1O35206 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Col15a1O35206 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Col15a1O35206 Gm10710-201ENSMUST00000047876 3971 ntBASIC17.35■□□□□ 0.37
Col15a1O35206 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Col15a1O35206 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Col15a1O35206 Gm2237-202ENSMUST00000170694 2090 ntAPPRIS P5 TSL 5 BASIC17.34■□□□□ 0.37
Col15a1O35206 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Col15a1O35206 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Col15a1O35206 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Col15a1O35206 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Col15a1O35206 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Col15a1O35206 Gm14381-201ENSMUST00000122105 414 ntBASIC17.34■□□□□ 0.37
Col15a1O35206 Gm11978-201ENSMUST00000122315 466 ntBASIC17.34■□□□□ 0.37
Col15a1O35206 Gm829-202ENSMUST00000146622 722 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Col15a1O35206 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC17.34■□□□□ 0.37
Col15a1O35206 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC17.34■□□□□ 0.37
Col15a1O35206 C030017D09Rik-201ENSMUST00000163690 923 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Col15a1O35206 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC17.34■□□□□ 0.37
Col15a1O35206 Gm5441-202ENSMUST00000190132 449 ntTSL 2 BASIC17.34■□□□□ 0.37
Col15a1O35206 Gm37312-201ENSMUST00000195753 685 ntTSL 5 BASIC17.34■□□□□ 0.37
Col15a1O35206 Tm2d2-202ENSMUST00000210536 727 ntTSL 3 BASIC17.34■□□□□ 0.37
Col15a1O35206 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Col15a1O35206 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC17.34■□□□□ 0.37
Col15a1O35206 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Col15a1O35206 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Col15a1O35206 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Col15a1O35206 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Col15a1O35206 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Col15a1O35206 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Col15a1O35206 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Col15a1O35206 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Col15a1O35206 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Col15a1O35206 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC17.34■□□□□ 0.37
Col15a1O35206 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Col15a1O35206 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Col15a1O35206 Gm38049-201ENSMUST00000195698 1372 ntBASIC17.33■□□□□ 0.37
Col15a1O35206 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Col15a1O35206 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Col15a1O35206 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Col15a1O35206 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Col15a1O35206 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Col15a1O35206 Eif3i-201ENSMUST00000102593 1123 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Col15a1O35206 Rps19-203ENSMUST00000108430 774 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Col15a1O35206 Gm44702-201ENSMUST00000209194 592 ntTSL 3 BASIC17.33■□□□□ 0.36
Col15a1O35206 Mt3-203ENSMUST00000211930 477 ntTSL 2 BASIC17.33■□□□□ 0.36
Col15a1O35206 Morn2-202ENSMUST00000227729 656 ntBASIC17.33■□□□□ 0.36
Col15a1O35206 Gm26513-201ENSMUST00000181802 2489 ntBASIC17.33■□□□□ 0.36
Col15a1O35206 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Col15a1O35206 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Col15a1O35206 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
Col15a1O35206 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Col15a1O35206 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Col15a1O35206 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Col15a1O35206 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Col15a1O35206 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Col15a1O35206 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Col15a1O35206 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Col15a1O35206 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Col15a1O35206 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Col15a1O35206 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Col15a1O35206 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Col15a1O35206 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Col15a1O35206 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC17.33■□□□□ 0.36
Col15a1O35206 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Col15a1O35206 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 228.1 ms