Protein–RNA interactions for Protein: O35134

Polr1a, DNA-directed RNA polymerase I subunit RPA1, mousemouse

Known RBP Predictions only

Length 1,717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Polr1aO35134 Ifna7-201ENSMUST00000105143 573 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
Polr1aO35134 Rbm3-202ENSMUST00000115615 1183 ntAPPRIS ALT1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Polr1aO35134 Rbm3-203ENSMUST00000115616 1225 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
Polr1aO35134 Gm8099-201ENSMUST00000200510 742 ntBASIC20.65■□□□□ 0.9
Polr1aO35134 AC126253.1-202ENSMUST00000226732 835 ntBASIC20.65■□□□□ 0.9
Polr1aO35134 Gm16519-201ENSMUST00000092011 489 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
Polr1aO35134 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Polr1aO35134 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Polr1aO35134 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Polr1aO35134 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Polr1aO35134 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC20.65■□□□□ 0.9
Polr1aO35134 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Polr1aO35134 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC20.65■□□□□ 0.9
Polr1aO35134 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
Polr1aO35134 Gm4366-201ENSMUST00000201488 1342 ntBASIC20.65■□□□□ 0.9
Polr1aO35134 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Polr1aO35134 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
Polr1aO35134 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Polr1aO35134 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Polr1aO35134 Gm23270-201ENSMUST00000104055 131 ntBASIC20.64■□□□□ 0.9
Polr1aO35134 Dctn6-203ENSMUST00000118811 934 ntTSL 3 BASIC20.64■□□□□ 0.9
Polr1aO35134 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC20.64■□□□□ 0.9
Polr1aO35134 H2afz-206ENSMUST00000173790 437 ntTSL 5 BASIC20.64■□□□□ 0.9
Polr1aO35134 1700065D16Rik-203ENSMUST00000189279 393 ntTSL 2 BASIC20.64■□□□□ 0.9
Polr1aO35134 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.9
Polr1aO35134 Gm40437-201ENSMUST00000222338 767 ntTSL 5 BASIC20.64■□□□□ 0.9
Polr1aO35134 CT025533.2-201ENSMUST00000228715 1248 ntBASIC20.64■□□□□ 0.9
Polr1aO35134 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Polr1aO35134 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Polr1aO35134 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
Polr1aO35134 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.9
Polr1aO35134 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
Polr1aO35134 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Polr1aO35134 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Polr1aO35134 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Polr1aO35134 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Polr1aO35134 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Polr1aO35134 Gm43399-201ENSMUST00000202546 2374 ntBASIC20.64■□□□□ 0.89
Polr1aO35134 4833427G06Rik-201ENSMUST00000170947 973 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Polr1aO35134 Gm17586-201ENSMUST00000181502 908 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Polr1aO35134 Anapc16-202ENSMUST00000182116 581 ntTSL 3 BASIC20.64■□□□□ 0.89
Polr1aO35134 AA914427-201ENSMUST00000193194 1166 ntBASIC20.64■□□□□ 0.89
Polr1aO35134 Gm44172-201ENSMUST00000203903 1235 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Polr1aO35134 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Polr1aO35134 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC20.64■□□□□ 0.89
Polr1aO35134 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
Polr1aO35134 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Polr1aO35134 Shroom3-211ENSMUST00000225438 5742 ntBASIC20.63■□□□□ 0.89
Polr1aO35134 Hsd3b3-203ENSMUST00000107018 1443 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Polr1aO35134 4933431M02Rik-201ENSMUST00000203905 1432 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Polr1aO35134 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Polr1aO35134 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Polr1aO35134 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Polr1aO35134 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
Polr1aO35134 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
Polr1aO35134 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Polr1aO35134 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Polr1aO35134 Fbp1-201ENSMUST00000092888 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Polr1aO35134 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
Polr1aO35134 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Polr1aO35134 Park7-202ENSMUST00000105673 919 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
Polr1aO35134 Pafah1b3-202ENSMUST00000108410 689 ntTSL 3 BASIC20.63■□□□□ 0.89
Polr1aO35134 Clic3-202ENSMUST00000114265 808 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Polr1aO35134 Gm13492-201ENSMUST00000119772 665 ntBASIC20.63■□□□□ 0.89
Polr1aO35134 H2al1g-201ENSMUST00000179859 509 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
Polr1aO35134 Ighv8-10-201ENSMUST00000199579 358 ntBASIC20.63■□□□□ 0.89
Polr1aO35134 1700011D18Rik-201ENSMUST00000205762 277 ntBASIC20.63■□□□□ 0.89
Polr1aO35134 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC20.63■□□□□ 0.89
Polr1aO35134 Tmem50a-201ENSMUST00000030626 1204 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Polr1aO35134 Psmb2-201ENSMUST00000030642 859 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Polr1aO35134 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
Polr1aO35134 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Polr1aO35134 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Polr1aO35134 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Polr1aO35134 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC20.62■□□□□ 0.89
Polr1aO35134 Rbm3-204ENSMUST00000115617 1152 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
Polr1aO35134 G630018N14Rik-201ENSMUST00000135656 1231 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Polr1aO35134 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC20.62■□□□□ 0.89
Polr1aO35134 Gm31256-201ENSMUST00000194705 506 ntBASIC20.62■□□□□ 0.89
Polr1aO35134 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC20.62■□□□□ 0.89
Polr1aO35134 Nccrp1-201ENSMUST00000057974 1531 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Polr1aO35134 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Polr1aO35134 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Polr1aO35134 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Polr1aO35134 Fut8-201ENSMUST00000062804 3358 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Polr1aO35134 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Polr1aO35134 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Polr1aO35134 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC20.62■□□□□ 0.89
Polr1aO35134 Gm37133-201ENSMUST00000192705 1922 ntBASIC20.62■□□□□ 0.89
Polr1aO35134 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Polr1aO35134 Gm28379-201ENSMUST00000186450 554 ntTSL 5 BASIC20.61■□□□□ 0.89
Polr1aO35134 Gm8885-201ENSMUST00000189382 598 ntBASIC20.61■□□□□ 0.89
Polr1aO35134 Calca-204ENSMUST00000205714 416 ntTSL 2 BASIC20.61■□□□□ 0.89
Polr1aO35134 Gm38979-201ENSMUST00000207099 698 ntTSL 3 BASIC20.61■□□□□ 0.89
Polr1aO35134 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Polr1aO35134 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Polr1aO35134 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
Polr1aO35134 0610037L13Rik-207ENSMUST00000125107 1551 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Polr1aO35134 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Polr1aO35134 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 25.4 ms