Protein–RNA interactions for Protein: E9Q414

Apob, Apolipoprotein B-100, mousemouse

Predictions only

Length 4,505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ApobE9Q414 Tm2d3-203ENSMUST00000107495 1003 ntAPPRIS P4 TSL 5 BASIC8.13□□□□□ -1.11
ApobE9Q414 Dynlrb1-202ENSMUST00000109682 684 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
ApobE9Q414 Gm16172-201ENSMUST00000156224 682 ntTSL 3 BASIC8.13□□□□□ -1.11
ApobE9Q414 Gm454-201ENSMUST00000160126 751 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
ApobE9Q414 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC8.13□□□□□ -1.11
ApobE9Q414 Gm42800-201ENSMUST00000202494 733 ntTSL 5 BASIC8.13□□□□□ -1.11
ApobE9Q414 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC8.13□□□□□ -1.11
ApobE9Q414 Gm30285-201ENSMUST00000214614 422 ntBASIC8.13□□□□□ -1.11
ApobE9Q414 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
ApobE9Q414 Il1f10-201ENSMUST00000058056 538 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
ApobE9Q414 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
ApobE9Q414 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
ApobE9Q414 Pitpnb-201ENSMUST00000086635 2761 ntAPPRIS P3 TSL 1 (best) BASIC8.13□□□□□ -1.11
ApobE9Q414 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
ApobE9Q414 Gm8228-201ENSMUST00000189949 2192 ntBASIC8.13□□□□□ -1.11
ApobE9Q414 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
ApobE9Q414 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC8.13□□□□□ -1.11
ApobE9Q414 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
ApobE9Q414 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
ApobE9Q414 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
ApobE9Q414 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC8.13□□□□□ -1.11
ApobE9Q414 Gm24845-201ENSMUST00000158034 109 ntBASIC8.13□□□□□ -1.11
ApobE9Q414 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC8.13□□□□□ -1.11
ApobE9Q414 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC8.13□□□□□ -1.11
ApobE9Q414 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
ApobE9Q414 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
ApobE9Q414 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC8.13□□□□□ -1.11
ApobE9Q414 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
ApobE9Q414 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC8.12□□□□□ -1.11
ApobE9Q414 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
ApobE9Q414 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
ApobE9Q414 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC8.12□□□□□ -1.11
ApobE9Q414 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC8.12□□□□□ -1.11
ApobE9Q414 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
ApobE9Q414 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
ApobE9Q414 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
ApobE9Q414 Vps25-204ENSMUST00000107280 876 ntTSL 2 BASIC8.12□□□□□ -1.11
ApobE9Q414 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
ApobE9Q414 Gm14235-201ENSMUST00000142445 366 ntTSL 3 BASIC8.12□□□□□ -1.11
ApobE9Q414 Gm28287-201ENSMUST00000186612 546 ntTSL 5 BASIC8.12□□□□□ -1.11
ApobE9Q414 Gm44136-201ENSMUST00000203819 1106 ntBASIC8.12□□□□□ -1.11
ApobE9Q414 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
ApobE9Q414 Rpl10a-ps2-201ENSMUST00000071184 642 ntBASIC8.12□□□□□ -1.11
ApobE9Q414 Nme8-202ENSMUST00000091763 2122 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
ApobE9Q414 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC8.12□□□□□ -1.11
ApobE9Q414 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC8.12□□□□□ -1.11
ApobE9Q414 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
ApobE9Q414 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC8.12□□□□□ -1.11
ApobE9Q414 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
ApobE9Q414 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
ApobE9Q414 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC8.12□□□□□ -1.11
ApobE9Q414 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
ApobE9Q414 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
ApobE9Q414 Gm23270-201ENSMUST00000104055 131 ntBASIC8.12□□□□□ -1.11
ApobE9Q414 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC8.12□□□□□ -1.11
ApobE9Q414 Gm12012-201ENSMUST00000118857 1066 ntBASIC8.12□□□□□ -1.11
ApobE9Q414 Gm12217-201ENSMUST00000118858 696 ntBASIC8.12□□□□□ -1.11
ApobE9Q414 Gm17208-201ENSMUST00000168388 535 ntBASIC8.12□□□□□ -1.11
ApobE9Q414 Tnnt1-213ENSMUST00000178163 934 ntAPPRIS ALT2 TSL 5 BASIC8.12□□□□□ -1.11
ApobE9Q414 Gm8856-201ENSMUST00000185254 1144 ntBASIC8.12□□□□□ -1.11
ApobE9Q414 Gm7593-201ENSMUST00000187246 644 ntBASIC8.12□□□□□ -1.11
ApobE9Q414 Tmem176b-206ENSMUST00000203355 1202 ntAPPRIS P1 TSL 5 BASIC8.12□□□□□ -1.11
ApobE9Q414 Blvrb-201ENSMUST00000037399 1028 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
ApobE9Q414 Gm44775-201ENSMUST00000207266 1456 ntBASIC8.12□□□□□ -1.11
ApobE9Q414 Crcp-201ENSMUST00000026608 1492 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
ApobE9Q414 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
ApobE9Q414 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC8.12□□□□□ -1.11
ApobE9Q414 Gm10787-201ENSMUST00000099552 1548 ntTSL 2 BASIC8.12□□□□□ -1.11
ApobE9Q414 Gm15897-201ENSMUST00000117770 1486 ntBASIC8.12□□□□□ -1.11
ApobE9Q414 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC8.12□□□□□ -1.11
ApobE9Q414 Pqbp1-203ENSMUST00000115655 1148 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
ApobE9Q414 Tmem267-202ENSMUST00000176171 880 ntAPPRIS P1 TSL 2 BASIC8.12□□□□□ -1.11
ApobE9Q414 Gm42817-201ENSMUST00000198962 607 ntTSL 3 BASIC8.12□□□□□ -1.11
ApobE9Q414 Gm44772-201ENSMUST00000207623 1191 ntBASIC8.12□□□□□ -1.11
ApobE9Q414 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC8.12□□□□□ -1.11
ApobE9Q414 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
ApobE9Q414 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
ApobE9Q414 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
ApobE9Q414 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC8.12□□□□□ -1.11
ApobE9Q414 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC8.12□□□□□ -1.11
ApobE9Q414 AC139054.1-201ENSMUST00000226898 1598 ntBASIC8.12□□□□□ -1.11
ApobE9Q414 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
ApobE9Q414 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
ApobE9Q414 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
ApobE9Q414 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC8.12□□□□□ -1.11
ApobE9Q414 Gm13124-201ENSMUST00000105748 1221 ntAPPRIS P1 TSL 5 BASIC8.11□□□□□ -1.11
ApobE9Q414 Ttc4-202ENSMUST00000106772 935 ntAPPRIS ALT2 TSL 5 BASIC8.11□□□□□ -1.11
ApobE9Q414 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC8.11□□□□□ -1.11
ApobE9Q414 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC8.11□□□□□ -1.11
ApobE9Q414 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC8.11□□□□□ -1.11
ApobE9Q414 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC8.11□□□□□ -1.11
ApobE9Q414 Gm37666-201ENSMUST00000194110 866 ntBASIC8.11□□□□□ -1.11
ApobE9Q414 S100a3-204ENSMUST00000200290 509 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
ApobE9Q414 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC8.11□□□□□ -1.11
ApobE9Q414 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC8.11□□□□□ -1.11
ApobE9Q414 Gm44967-201ENSMUST00000207047 631 ntBASIC8.11□□□□□ -1.11
ApobE9Q414 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC8.11□□□□□ -1.11
ApobE9Q414 Cga-201ENSMUST00000029975 687 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
ApobE9Q414 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
ApobE9Q414 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Retrieved 100 of 76,532 protein–RNA pairs in 50.1 ms