Protein–RNA interactions for Protein: E9PZM7

Scaf11, SR-related CTD-associated factor 11, mousemouse

Known RBP Predictions only

Length 1,456 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf11E9PZM7 Gm10787-201ENSMUST00000099552 1548 ntTSL 2 BASIC18.8■□□□□ 0.6
Scaf11E9PZM7 Lrrfip2-214ENSMUST00000217117 1363 ntTSL 5 BASIC18.8■□□□□ 0.6
Scaf11E9PZM7 Nek3-201ENSMUST00000033865 2021 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Scaf11E9PZM7 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Scaf11E9PZM7 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Scaf11E9PZM7 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Scaf11E9PZM7 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Scaf11E9PZM7 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Scaf11E9PZM7 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Scaf11E9PZM7 Gm29340-201ENSMUST00000188763 3854 ntBASIC18.8■□□□□ 0.6
Scaf11E9PZM7 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Scaf11E9PZM7 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC18.8■□□□□ 0.6
Scaf11E9PZM7 Gm11531-201ENSMUST00000117614 555 ntBASIC18.8■□□□□ 0.6
Scaf11E9PZM7 Gm16036-201ENSMUST00000150385 1112 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Scaf11E9PZM7 Gm38139-201ENSMUST00000195806 704 ntTSL 2 BASIC18.8■□□□□ 0.6
Scaf11E9PZM7 Gm45118-201ENSMUST00000208928 825 ntBASIC18.8■□□□□ 0.6
Scaf11E9PZM7 Gm45770-201ENSMUST00000212105 616 ntBASIC18.8■□□□□ 0.6
Scaf11E9PZM7 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Scaf11E9PZM7 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Scaf11E9PZM7 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC18.8■□□□□ 0.6
Scaf11E9PZM7 Prss43-201ENSMUST00000077549 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Scaf11E9PZM7 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Scaf11E9PZM7 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Scaf11E9PZM7 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Scaf11E9PZM7 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Scaf11E9PZM7 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Scaf11E9PZM7 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Scaf11E9PZM7 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Scaf11E9PZM7 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Scaf11E9PZM7 Gm15395-201ENSMUST00000153724 702 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Scaf11E9PZM7 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC18.79■□□□□ 0.6
Scaf11E9PZM7 Gm8885-201ENSMUST00000189382 598 ntBASIC18.79■□□□□ 0.6
Scaf11E9PZM7 Gm5051-201ENSMUST00000204085 485 ntBASIC18.79■□□□□ 0.6
Scaf11E9PZM7 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC18.79■□□□□ 0.6
Scaf11E9PZM7 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Scaf11E9PZM7 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Scaf11E9PZM7 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Scaf11E9PZM7 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Scaf11E9PZM7 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC18.79■□□□□ 0.6
Scaf11E9PZM7 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Scaf11E9PZM7 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Scaf11E9PZM7 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Scaf11E9PZM7 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Scaf11E9PZM7 AC167669.2-201ENSMUST00000224417 1620 ntBASIC18.79■□□□□ 0.6
Scaf11E9PZM7 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Scaf11E9PZM7 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Scaf11E9PZM7 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Scaf11E9PZM7 Smyd3-202ENSMUST00000111134 1229 ntTSL 2 BASIC18.78■□□□□ 0.6
Scaf11E9PZM7 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Scaf11E9PZM7 H2afz-206ENSMUST00000173790 437 ntTSL 5 BASIC18.78■□□□□ 0.6
Scaf11E9PZM7 Gm3508-201ENSMUST00000186012 792 ntBASIC18.78■□□□□ 0.6
Scaf11E9PZM7 Gm43701-201ENSMUST00000202047 391 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Scaf11E9PZM7 AC141438.2-201ENSMUST00000215068 271 ntBASIC18.78■□□□□ 0.6
Scaf11E9PZM7 Treml1-205ENSMUST00000225849 974 ntAPPRIS ALT2 BASIC18.78■□□□□ 0.6
Scaf11E9PZM7 AC135114.1-201ENSMUST00000228682 270 ntBASIC18.78■□□□□ 0.6
Scaf11E9PZM7 Nppc-201ENSMUST00000027449 1042 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Scaf11E9PZM7 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Scaf11E9PZM7 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC18.78■□□□□ 0.6
Scaf11E9PZM7 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Scaf11E9PZM7 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Scaf11E9PZM7 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Scaf11E9PZM7 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Scaf11E9PZM7 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Scaf11E9PZM7 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Scaf11E9PZM7 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Scaf11E9PZM7 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Scaf11E9PZM7 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Scaf11E9PZM7 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Scaf11E9PZM7 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Scaf11E9PZM7 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Scaf11E9PZM7 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Scaf11E9PZM7 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Scaf11E9PZM7 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
Scaf11E9PZM7 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
Scaf11E9PZM7 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
Scaf11E9PZM7 Gm26185-201ENSMUST00000157692 266 ntBASIC18.77■□□□□ 0.6
Scaf11E9PZM7 Gm8584-201ENSMUST00000171982 758 ntBASIC18.77■□□□□ 0.6
Scaf11E9PZM7 Gm29054-201ENSMUST00000187589 1185 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Scaf11E9PZM7 Gm44545-201ENSMUST00000208262 746 ntBASIC18.77■□□□□ 0.6
Scaf11E9PZM7 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC18.77■□□□□ 0.6
Scaf11E9PZM7 Gm32025-201ENSMUST00000217960 307 ntBASIC18.77■□□□□ 0.6
Scaf11E9PZM7 Asb8-201ENSMUST00000059112 1049 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Scaf11E9PZM7 Pitpnb-201ENSMUST00000086635 2761 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
Scaf11E9PZM7 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Scaf11E9PZM7 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Scaf11E9PZM7 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Scaf11E9PZM7 Gm38102-201ENSMUST00000192791 1935 ntBASIC18.77■□□□□ 0.6
Scaf11E9PZM7 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Scaf11E9PZM7 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Scaf11E9PZM7 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Scaf11E9PZM7 Eif4ebp2-202ENSMUST00000167087 1422 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
Scaf11E9PZM7 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Scaf11E9PZM7 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Scaf11E9PZM7 Elovl3-201ENSMUST00000043739 1494 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Scaf11E9PZM7 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
Scaf11E9PZM7 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Scaf11E9PZM7 Gm13813-201ENSMUST00000120998 787 ntBASIC18.77■□□□□ 0.59
Scaf11E9PZM7 Iqcf6-201ENSMUST00000171091 537 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.59
Scaf11E9PZM7 Cryab-201ENSMUST00000034562 946 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Scaf11E9PZM7 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 25.9 ms