Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Col6a3E9PWQ3 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Col6a3E9PWQ3 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Col6a3E9PWQ3 Fez1-208ENSMUST00000163816 1285 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Col6a3E9PWQ3 Gm45570-201ENSMUST00000211137 495 ntTSL 5 BASIC13.33□□□□□ -0.28
Col6a3E9PWQ3 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Col6a3E9PWQ3 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Col6a3E9PWQ3 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Col6a3E9PWQ3 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Col6a3E9PWQ3 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Col6a3E9PWQ3 Pdxk-ps-202ENSMUST00000160550 876 ntBASIC13.32□□□□□ -0.28
Col6a3E9PWQ3 Gm28388-201ENSMUST00000186262 437 ntBASIC13.32□□□□□ -0.28
Col6a3E9PWQ3 Snrpg-201ENSMUST00000089558 1055 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Col6a3E9PWQ3 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC13.32□□□□□ -0.28
Col6a3E9PWQ3 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Col6a3E9PWQ3 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Col6a3E9PWQ3 Fank1-201ENSMUST00000065359 2004 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Col6a3E9PWQ3 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Col6a3E9PWQ3 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Col6a3E9PWQ3 Tsc22d4-204ENSMUST00000110983 1043 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Col6a3E9PWQ3 Gm15711-201ENSMUST00000118889 535 ntBASIC13.32□□□□□ -0.28
Col6a3E9PWQ3 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Col6a3E9PWQ3 Gm26185-201ENSMUST00000157692 266 ntBASIC13.32□□□□□ -0.28
Col6a3E9PWQ3 Pfdn6-202ENSMUST00000173363 871 ntTSL 2 BASIC13.32□□□□□ -0.28
Col6a3E9PWQ3 Gm5732-201ENSMUST00000182596 1007 ntBASIC13.32□□□□□ -0.28
Col6a3E9PWQ3 4930430O22Rik-202ENSMUST00000202548 579 ntBASIC13.32□□□□□ -0.28
Col6a3E9PWQ3 Gm36503-201ENSMUST00000204284 875 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Col6a3E9PWQ3 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Col6a3E9PWQ3 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Col6a3E9PWQ3 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Col6a3E9PWQ3 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Col6a3E9PWQ3 Gstm4-202ENSMUST00000106670 777 ntTSL 3 BASIC13.31□□□□□ -0.28
Col6a3E9PWQ3 Hopx-202ENSMUST00000113453 1113 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Col6a3E9PWQ3 Gm16202-201ENSMUST00000117532 544 ntBASIC13.31□□□□□ -0.28
Col6a3E9PWQ3 Gm7985-201ENSMUST00000183329 981 ntBASIC13.31□□□□□ -0.28
Col6a3E9PWQ3 Gm34655-202ENSMUST00000215259 877 ntTSL 3 BASIC13.31□□□□□ -0.28
Col6a3E9PWQ3 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC13.31□□□□□ -0.28
Col6a3E9PWQ3 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Col6a3E9PWQ3 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Col6a3E9PWQ3 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC13.31□□□□□ -0.28
Col6a3E9PWQ3 Txndc12-201ENSMUST00000030296 1359 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Col6a3E9PWQ3 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC13.31□□□□□ -0.28
Col6a3E9PWQ3 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC13.31□□□□□ -0.28
Col6a3E9PWQ3 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Col6a3E9PWQ3 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Col6a3E9PWQ3 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Col6a3E9PWQ3 Efs-202ENSMUST00000227037 2540 ntBASIC13.31□□□□□ -0.28
Col6a3E9PWQ3 Gm14058-201ENSMUST00000116082 735 ntBASIC13.31□□□□□ -0.28
Col6a3E9PWQ3 H2-Q3-201ENSMUST00000172583 608 ntBASIC13.31□□□□□ -0.28
Col6a3E9PWQ3 Gm43520-201ENSMUST00000197996 164 ntBASIC13.31□□□□□ -0.28
Col6a3E9PWQ3 Gm35960-201ENSMUST00000202712 767 ntBASIC13.31□□□□□ -0.28
Col6a3E9PWQ3 AC168279.1-201ENSMUST00000214611 382 ntBASIC13.31□□□□□ -0.28
Col6a3E9PWQ3 Gm5513-201ENSMUST00000072982 1218 ntBASIC13.31□□□□□ -0.28
Col6a3E9PWQ3 Adh6a-202ENSMUST00000106247 1341 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Col6a3E9PWQ3 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Col6a3E9PWQ3 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Col6a3E9PWQ3 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Col6a3E9PWQ3 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Col6a3E9PWQ3 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Col6a3E9PWQ3 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Col6a3E9PWQ3 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Col6a3E9PWQ3 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Col6a3E9PWQ3 9430021M05Rik-201ENSMUST00000145985 1201 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Col6a3E9PWQ3 Gm25998-201ENSMUST00000175397 53 ntBASIC13.31□□□□□ -0.28
Col6a3E9PWQ3 Rbp2-202ENSMUST00000187905 611 ntAPPRIS P1 TSL 3 BASIC13.31□□□□□ -0.28
Col6a3E9PWQ3 Gm44329-201ENSMUST00000197469 112 ntBASIC13.31□□□□□ -0.28
Col6a3E9PWQ3 Higd2a-201ENSMUST00000026986 648 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Col6a3E9PWQ3 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Col6a3E9PWQ3 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC13.31□□□□□ -0.28
Col6a3E9PWQ3 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Col6a3E9PWQ3 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Col6a3E9PWQ3 Gm11595-201ENSMUST00000107440 1200 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Col6a3E9PWQ3 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Col6a3E9PWQ3 2810408I11Rik-201ENSMUST00000122813 435 ntTSL 2 BASIC13.3□□□□□ -0.28
Col6a3E9PWQ3 Mir7686-201ENSMUST00000200604 57 ntBASIC13.3□□□□□ -0.28
Col6a3E9PWQ3 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Col6a3E9PWQ3 Rpl4-201ENSMUST00000034966 1538 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Col6a3E9PWQ3 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Col6a3E9PWQ3 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Col6a3E9PWQ3 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Col6a3E9PWQ3 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Col6a3E9PWQ3 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Col6a3E9PWQ3 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Col6a3E9PWQ3 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Col6a3E9PWQ3 Derl2-202ENSMUST00000108523 884 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Col6a3E9PWQ3 Gm6254-201ENSMUST00000168178 1072 ntBASIC13.3□□□□□ -0.28
Col6a3E9PWQ3 Vdac1-201ENSMUST00000020673 891 ntTSL 5 BASIC13.3□□□□□ -0.28
Col6a3E9PWQ3 Fam151b-201ENSMUST00000040106 1152 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Col6a3E9PWQ3 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Col6a3E9PWQ3 Mir219a-1-201ENSMUST00000083621 110 ntBASIC13.3□□□□□ -0.28
Col6a3E9PWQ3 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Col6a3E9PWQ3 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Col6a3E9PWQ3 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Col6a3E9PWQ3 Wdr45-203ENSMUST00000115688 1510 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Col6a3E9PWQ3 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Col6a3E9PWQ3 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Col6a3E9PWQ3 BB557941-201ENSMUST00000126549 1097 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Col6a3E9PWQ3 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC13.3□□□□□ -0.28
Col6a3E9PWQ3 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Col6a3E9PWQ3 Rps28-202ENSMUST00000166693 271 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 47 ms