Protein–RNA interactions for Protein: E9PUL3

Clca3b, Chloride channel accessory 3B, mousemouse

Predictions only

Length 1,044 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clca3bE9PUL3 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
Clca3bE9PUL3 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Clca3bE9PUL3 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Clca3bE9PUL3 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Clca3bE9PUL3 Gm12928-201ENSMUST00000117115 573 ntBASIC14.7□□□□□ -0.06
Clca3bE9PUL3 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC14.7□□□□□ -0.06
Clca3bE9PUL3 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC14.7□□□□□ -0.06
Clca3bE9PUL3 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Clca3bE9PUL3 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC14.7□□□□□ -0.06
Clca3bE9PUL3 Gm5035-201ENSMUST00000215581 927 ntBASIC14.7□□□□□ -0.06
Clca3bE9PUL3 AC130829.1-201ENSMUST00000221548 494 ntBASIC14.7□□□□□ -0.06
Clca3bE9PUL3 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Clca3bE9PUL3 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Clca3bE9PUL3 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Clca3bE9PUL3 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Clca3bE9PUL3 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Clca3bE9PUL3 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Clca3bE9PUL3 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
Clca3bE9PUL3 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
Clca3bE9PUL3 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Clca3bE9PUL3 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
Clca3bE9PUL3 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Clca3bE9PUL3 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Clca3bE9PUL3 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
Clca3bE9PUL3 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Clca3bE9PUL3 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Clca3bE9PUL3 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Clca3bE9PUL3 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Clca3bE9PUL3 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Clca3bE9PUL3 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Clca3bE9PUL3 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Clca3bE9PUL3 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Clca3bE9PUL3 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Clca3bE9PUL3 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Clca3bE9PUL3 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC14.69□□□□□ -0.06
Clca3bE9PUL3 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Clca3bE9PUL3 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC14.69□□□□□ -0.06
Clca3bE9PUL3 Gm9002-201ENSMUST00000178437 499 ntBASIC14.69□□□□□ -0.06
Clca3bE9PUL3 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Clca3bE9PUL3 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Clca3bE9PUL3 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC14.69□□□□□ -0.06
Clca3bE9PUL3 AC125117.1-201ENSMUST00000228121 468 ntBASIC14.69□□□□□ -0.06
Clca3bE9PUL3 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
Clca3bE9PUL3 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Clca3bE9PUL3 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Clca3bE9PUL3 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Clca3bE9PUL3 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
Clca3bE9PUL3 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC14.69□□□□□ -0.06
Clca3bE9PUL3 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Clca3bE9PUL3 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Clca3bE9PUL3 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Clca3bE9PUL3 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Clca3bE9PUL3 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
Clca3bE9PUL3 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
Clca3bE9PUL3 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
Clca3bE9PUL3 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC14.69□□□□□ -0.06
Clca3bE9PUL3 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Clca3bE9PUL3 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Clca3bE9PUL3 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Clca3bE9PUL3 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
Clca3bE9PUL3 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Clca3bE9PUL3 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Clca3bE9PUL3 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC14.68□□□□□ -0.06
Clca3bE9PUL3 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Clca3bE9PUL3 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Clca3bE9PUL3 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Clca3bE9PUL3 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Clca3bE9PUL3 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Clca3bE9PUL3 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Clca3bE9PUL3 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC14.68□□□□□ -0.06
Clca3bE9PUL3 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Clca3bE9PUL3 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Clca3bE9PUL3 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Clca3bE9PUL3 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC14.68□□□□□ -0.06
Clca3bE9PUL3 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Clca3bE9PUL3 Gm38197-201ENSMUST00000192320 2122 ntBASIC14.68□□□□□ -0.06
Clca3bE9PUL3 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Clca3bE9PUL3 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Clca3bE9PUL3 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Clca3bE9PUL3 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Clca3bE9PUL3 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Clca3bE9PUL3 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Clca3bE9PUL3 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Clca3bE9PUL3 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC14.68□□□□□ -0.06
Clca3bE9PUL3 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC14.68□□□□□ -0.06
Clca3bE9PUL3 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Clca3bE9PUL3 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
Clca3bE9PUL3 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
Clca3bE9PUL3 Gm15371-201ENSMUST00000117057 784 ntBASIC14.68□□□□□ -0.06
Clca3bE9PUL3 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC14.68□□□□□ -0.06
Clca3bE9PUL3 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC14.68□□□□□ -0.06
Clca3bE9PUL3 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Clca3bE9PUL3 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Clca3bE9PUL3 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC14.68□□□□□ -0.06
Clca3bE9PUL3 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Clca3bE9PUL3 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Clca3bE9PUL3 Gm38144-201ENSMUST00000192790 465 ntBASIC14.68□□□□□ -0.06
Clca3bE9PUL3 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC14.68□□□□□ -0.06
Clca3bE9PUL3 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Clca3bE9PUL3 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms