Protein–RNA interactions for Protein: B1AYL1

Scn7a, Sodium channel protein, mousemouse

Predictions only

Length 1,681 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn7aB1AYL1 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Scn7aB1AYL1 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Scn7aB1AYL1 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Scn7aB1AYL1 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Scn7aB1AYL1 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Scn7aB1AYL1 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Scn7aB1AYL1 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Scn7aB1AYL1 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
Scn7aB1AYL1 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC17.27■□□□□ 0.35
Scn7aB1AYL1 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Scn7aB1AYL1 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Scn7aB1AYL1 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC17.27■□□□□ 0.35
Scn7aB1AYL1 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Scn7aB1AYL1 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Scn7aB1AYL1 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Scn7aB1AYL1 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
Scn7aB1AYL1 Gm4366-201ENSMUST00000201488 1342 ntBASIC17.26■□□□□ 0.35
Scn7aB1AYL1 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Scn7aB1AYL1 Sectm1a-204ENSMUST00000106120 1020 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Scn7aB1AYL1 Gm12216-202ENSMUST00000120776 826 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
Scn7aB1AYL1 Gm11290-201ENSMUST00000124833 396 ntTSL 3 BASIC17.26■□□□□ 0.35
Scn7aB1AYL1 Gm15738-202ENSMUST00000140892 427 ntTSL 2 BASIC17.26■□□□□ 0.35
Scn7aB1AYL1 Gm11210-201ENSMUST00000150203 422 ntTSL 3 BASIC17.26■□□□□ 0.35
Scn7aB1AYL1 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Scn7aB1AYL1 Gm27239-201ENSMUST00000184638 642 ntTSL 3 BASIC17.26■□□□□ 0.35
Scn7aB1AYL1 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC17.26■□□□□ 0.35
Scn7aB1AYL1 AC155637.1-201ENSMUST00000218560 636 ntBASIC17.26■□□□□ 0.35
Scn7aB1AYL1 Morn3-201ENSMUST00000031437 1128 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Scn7aB1AYL1 Ggact-201ENSMUST00000038075 1076 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Scn7aB1AYL1 Olfr156-202ENSMUST00000079465 1099 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Scn7aB1AYL1 Zdhhc12-201ENSMUST00000081838 1187 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Scn7aB1AYL1 Cryge-201ENSMUST00000087359 631 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Scn7aB1AYL1 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Scn7aB1AYL1 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Scn7aB1AYL1 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Scn7aB1AYL1 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Scn7aB1AYL1 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC17.26■□□□□ 0.35
Scn7aB1AYL1 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Scn7aB1AYL1 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Scn7aB1AYL1 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Scn7aB1AYL1 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Scn7aB1AYL1 1700088E04Rik-212ENSMUST00000190959 1403 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Scn7aB1AYL1 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Scn7aB1AYL1 4933411K16Rik-201ENSMUST00000164518 1380 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Scn7aB1AYL1 Akt1-205ENSMUST00000128300 1342 ntTSL 5 BASIC17.26■□□□□ 0.35
Scn7aB1AYL1 Lcn6-203ENSMUST00000114199 729 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Scn7aB1AYL1 Rbm3-202ENSMUST00000115615 1183 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Scn7aB1AYL1 Rbm3-203ENSMUST00000115616 1225 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Scn7aB1AYL1 Gm11439-201ENSMUST00000118598 409 ntBASIC17.26■□□□□ 0.35
Scn7aB1AYL1 Ftl1-ps2-201ENSMUST00000169477 549 ntBASIC17.26■□□□□ 0.35
Scn7aB1AYL1 Gm17586-201ENSMUST00000181502 908 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Scn7aB1AYL1 Swi5-207ENSMUST00000183946 768 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Scn7aB1AYL1 AA914427-201ENSMUST00000193194 1166 ntBASIC17.26■□□□□ 0.35
Scn7aB1AYL1 4930479H17Rik-201ENSMUST00000208824 292 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Scn7aB1AYL1 Psmb2-201ENSMUST00000030642 859 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Scn7aB1AYL1 Rnf7-201ENSMUST00000057500 1232 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Scn7aB1AYL1 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Scn7aB1AYL1 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Scn7aB1AYL1 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Scn7aB1AYL1 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Scn7aB1AYL1 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Scn7aB1AYL1 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Scn7aB1AYL1 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Scn7aB1AYL1 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Scn7aB1AYL1 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Scn7aB1AYL1 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Scn7aB1AYL1 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Scn7aB1AYL1 Gm23363-201ENSMUST00000175024 79 ntBASIC17.25■□□□□ 0.35
Scn7aB1AYL1 Gm8885-201ENSMUST00000189382 598 ntBASIC17.25■□□□□ 0.35
Scn7aB1AYL1 Gm9445-201ENSMUST00000207454 1285 ntBASIC17.25■□□□□ 0.35
Scn7aB1AYL1 Gm18615-201ENSMUST00000222919 1031 ntBASIC17.25■□□□□ 0.35
Scn7aB1AYL1 AC166095.1-201ENSMUST00000223731 1241 ntBASIC17.25■□□□□ 0.35
Scn7aB1AYL1 Ctrb1-201ENSMUST00000034435 878 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Scn7aB1AYL1 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Scn7aB1AYL1 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Scn7aB1AYL1 Tspan32-203ENSMUST00000082008 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Scn7aB1AYL1 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Scn7aB1AYL1 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC17.25■□□□□ 0.35
Scn7aB1AYL1 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Scn7aB1AYL1 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Scn7aB1AYL1 Gm38157-201ENSMUST00000194178 1698 ntBASIC17.24■□□□□ 0.35
Scn7aB1AYL1 Gm12626-201ENSMUST00000117339 1983 ntBASIC17.24■□□□□ 0.35
Scn7aB1AYL1 Gm12623-201ENSMUST00000119849 1983 ntBASIC17.24■□□□□ 0.35
Scn7aB1AYL1 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Scn7aB1AYL1 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Scn7aB1AYL1 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Scn7aB1AYL1 Gm11531-201ENSMUST00000117614 555 ntBASIC17.24■□□□□ 0.35
Scn7aB1AYL1 F630206G17Rik-201ENSMUST00000137002 685 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Scn7aB1AYL1 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Scn7aB1AYL1 Gm5597-201ENSMUST00000182353 1193 ntBASIC17.24■□□□□ 0.35
Scn7aB1AYL1 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Scn7aB1AYL1 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC17.24■□□□□ 0.35
Scn7aB1AYL1 Calca-204ENSMUST00000205714 416 ntTSL 2 BASIC17.24■□□□□ 0.35
Scn7aB1AYL1 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC17.24■□□□□ 0.35
Scn7aB1AYL1 Psma1-201ENSMUST00000033008 1201 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Scn7aB1AYL1 Lrrc52-201ENSMUST00000036643 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Scn7aB1AYL1 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Scn7aB1AYL1 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Scn7aB1AYL1 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Scn7aB1AYL1 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms