Protein–RNA interactions for Protein: A0A075B652

Trav5-4, T cell receptor alpha variable 5-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5-4A0A075B652 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav5-4A0A075B652 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Trav5-4A0A075B652 Armc8-201ENSMUST00000035043 4647 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav5-4A0A075B652 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC11.49□□□□□ -0.57
Trav5-4A0A075B652 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav5-4A0A075B652 AI464131-201ENSMUST00000054920 4173 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav5-4A0A075B652 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav5-4A0A075B652 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC11.49□□□□□ -0.57
Trav5-4A0A075B652 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav5-4A0A075B652 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Trav5-4A0A075B652 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav5-4A0A075B652 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Trav5-4A0A075B652 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Trav5-4A0A075B652 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav5-4A0A075B652 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav5-4A0A075B652 Gm5566-201ENSMUST00000116118 459 ntBASIC11.49□□□□□ -0.57
Trav5-4A0A075B652 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC11.49□□□□□ -0.57
Trav5-4A0A075B652 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Trav5-4A0A075B652 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC11.49□□□□□ -0.57
Trav5-4A0A075B652 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC11.49□□□□□ -0.57
Trav5-4A0A075B652 Gm29541-201ENSMUST00000191351 678 ntBASIC11.49□□□□□ -0.57
Trav5-4A0A075B652 Gm43073-201ENSMUST00000198200 1189 ntBASIC11.49□□□□□ -0.57
Trav5-4A0A075B652 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC11.49□□□□□ -0.57
Trav5-4A0A075B652 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC11.49□□□□□ -0.57
Trav5-4A0A075B652 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Trav5-4A0A075B652 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav5-4A0A075B652 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC11.49□□□□□ -0.57
Trav5-4A0A075B652 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav5-4A0A075B652 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC11.49□□□□□ -0.57
Trav5-4A0A075B652 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav5-4A0A075B652 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC11.49□□□□□ -0.57
Trav5-4A0A075B652 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav5-4A0A075B652 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC11.49□□□□□ -0.57
Trav5-4A0A075B652 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav5-4A0A075B652 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav5-4A0A075B652 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav5-4A0A075B652 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Trav5-4A0A075B652 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav5-4A0A075B652 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Trav5-4A0A075B652 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav5-4A0A075B652 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Trav5-4A0A075B652 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav5-4A0A075B652 Gm12626-201ENSMUST00000117339 1983 ntBASIC11.48□□□□□ -0.57
Trav5-4A0A075B652 Gm12623-201ENSMUST00000119849 1983 ntBASIC11.48□□□□□ -0.57
Trav5-4A0A075B652 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav5-4A0A075B652 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav5-4A0A075B652 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Trav5-4A0A075B652 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav5-4A0A075B652 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Trav5-4A0A075B652 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav5-4A0A075B652 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav5-4A0A075B652 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav5-4A0A075B652 Gm22065-201ENSMUST00000103753 110 ntBASIC11.48□□□□□ -0.57
Trav5-4A0A075B652 Gm22066-201ENSMUST00000103761 110 ntBASIC11.48□□□□□ -0.57
Trav5-4A0A075B652 Gm24932-201ENSMUST00000103763 110 ntBASIC11.48□□□□□ -0.57
Trav5-4A0A075B652 Gm24115-201ENSMUST00000103799 110 ntBASIC11.48□□□□□ -0.57
Trav5-4A0A075B652 Gm22190-201ENSMUST00000103827 110 ntBASIC11.48□□□□□ -0.57
Trav5-4A0A075B652 Gm22191-201ENSMUST00000103831 110 ntBASIC11.48□□□□□ -0.57
Trav5-4A0A075B652 Gm24721-201ENSMUST00000103849 110 ntBASIC11.48□□□□□ -0.57
Trav5-4A0A075B652 Gm28018-201ENSMUST00000103869 110 ntBASIC11.48□□□□□ -0.57
Trav5-4A0A075B652 Gm26399-201ENSMUST00000103937 110 ntBASIC11.48□□□□□ -0.57
Trav5-4A0A075B652 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav5-4A0A075B652 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC11.48□□□□□ -0.57
Trav5-4A0A075B652 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Trav5-4A0A075B652 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC11.48□□□□□ -0.57
Trav5-4A0A075B652 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC11.48□□□□□ -0.57
Trav5-4A0A075B652 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Trav5-4A0A075B652 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC11.48□□□□□ -0.57
Trav5-4A0A075B652 Gm25349-201ENSMUST00000177728 110 ntBASIC11.48□□□□□ -0.57
Trav5-4A0A075B652 Gm23616-201ENSMUST00000177797 110 ntBASIC11.48□□□□□ -0.57
Trav5-4A0A075B652 Gm25871-201ENSMUST00000177816 110 ntBASIC11.48□□□□□ -0.57
Trav5-4A0A075B652 Gm24752-201ENSMUST00000178240 110 ntBASIC11.48□□□□□ -0.57
Trav5-4A0A075B652 Gm24496-201ENSMUST00000178287 110 ntBASIC11.48□□□□□ -0.57
Trav5-4A0A075B652 Gm25649-201ENSMUST00000178476 110 ntBASIC11.48□□□□□ -0.57
Trav5-4A0A075B652 Gm25548-201ENSMUST00000178681 110 ntBASIC11.48□□□□□ -0.57
Trav5-4A0A075B652 Gm23147-201ENSMUST00000178841 110 ntBASIC11.48□□□□□ -0.57
Trav5-4A0A075B652 Gm26095-201ENSMUST00000179270 110 ntBASIC11.48□□□□□ -0.57
Trav5-4A0A075B652 Gm22171-201ENSMUST00000179283 110 ntBASIC11.48□□□□□ -0.57
Trav5-4A0A075B652 Gm23936-201ENSMUST00000179354 110 ntBASIC11.48□□□□□ -0.57
Trav5-4A0A075B652 Gm22619-201ENSMUST00000179516 110 ntBASIC11.48□□□□□ -0.57
Trav5-4A0A075B652 Gm25255-201ENSMUST00000179579 110 ntBASIC11.48□□□□□ -0.57
Trav5-4A0A075B652 Gm24755-201ENSMUST00000179691 110 ntBASIC11.48□□□□□ -0.57
Trav5-4A0A075B652 Gm26506-201ENSMUST00000179692 110 ntBASIC11.48□□□□□ -0.57
Trav5-4A0A075B652 Gm25086-201ENSMUST00000179931 110 ntBASIC11.48□□□□□ -0.57
Trav5-4A0A075B652 Gm23243-201ENSMUST00000180047 110 ntBASIC11.48□□□□□ -0.57
Trav5-4A0A075B652 Gm24659-201ENSMUST00000180212 110 ntBASIC11.48□□□□□ -0.57
Trav5-4A0A075B652 Gm24169-201ENSMUST00000180244 110 ntBASIC11.48□□□□□ -0.57
Trav5-4A0A075B652 Gm23689-201ENSMUST00000180354 110 ntBASIC11.48□□□□□ -0.57
Trav5-4A0A075B652 Gm27359-201ENSMUST00000184153 110 ntBASIC11.48□□□□□ -0.57
Trav5-4A0A075B652 Gm27785-201ENSMUST00000184268 110 ntBASIC11.48□□□□□ -0.57
Trav5-4A0A075B652 Gm27466-201ENSMUST00000184396 110 ntBASIC11.48□□□□□ -0.57
Trav5-4A0A075B652 Gm27703-201ENSMUST00000184836 110 ntBASIC11.48□□□□□ -0.57
Trav5-4A0A075B652 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC11.48□□□□□ -0.57
Trav5-4A0A075B652 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Trav5-4A0A075B652 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Trav5-4A0A075B652 Gm2756-201ENSMUST00000195851 400 ntBASIC11.48□□□□□ -0.57
Trav5-4A0A075B652 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Trav5-4A0A075B652 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC11.48□□□□□ -0.57
Trav5-4A0A075B652 AC132104.2-201ENSMUST00000215011 266 ntBASIC11.48□□□□□ -0.57
Trav5-4A0A075B652 AC090659.2-201ENSMUST00000225378 1186 ntBASIC11.48□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 49.4 ms