Protein–RNA interactions for Protein: Q9Z0H3

Smarcb1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1, mousemouse

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcb1Q9Z0H3 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC22.57■■□□□ 1.2
Smarcb1Q9Z0H3 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Smarcb1Q9Z0H3 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC22.57■■□□□ 1.2
Smarcb1Q9Z0H3 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Smarcb1Q9Z0H3 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Smarcb1Q9Z0H3 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC22.56■■□□□ 1.2
Smarcb1Q9Z0H3 Gm5131-201ENSMUST00000212776 1238 ntBASIC22.56■■□□□ 1.2
Smarcb1Q9Z0H3 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC22.56■■□□□ 1.2
Smarcb1Q9Z0H3 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Smarcb1Q9Z0H3 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC22.56■■□□□ 1.2
Smarcb1Q9Z0H3 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Smarcb1Q9Z0H3 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC22.55■■□□□ 1.2
Smarcb1Q9Z0H3 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Smarcb1Q9Z0H3 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC22.55■■□□□ 1.2
Smarcb1Q9Z0H3 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC22.55■■□□□ 1.2
Smarcb1Q9Z0H3 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC22.55■■□□□ 1.2
Smarcb1Q9Z0H3 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Smarcb1Q9Z0H3 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC22.54■■□□□ 1.2
Smarcb1Q9Z0H3 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC22.54■■□□□ 1.2
Smarcb1Q9Z0H3 Etf1-202ENSMUST00000180351 108 ntBASIC22.54■■□□□ 1.2
Smarcb1Q9Z0H3 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Smarcb1Q9Z0H3 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC22.53■■□□□ 1.2
Smarcb1Q9Z0H3 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Smarcb1Q9Z0H3 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC22.53■■□□□ 1.2
Smarcb1Q9Z0H3 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC22.53■■□□□ 1.2
Smarcb1Q9Z0H3 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Smarcb1Q9Z0H3 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC22.52■■□□□ 1.2
Smarcb1Q9Z0H3 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Smarcb1Q9Z0H3 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC22.52■■□□□ 1.2
Smarcb1Q9Z0H3 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC22.52■■□□□ 1.2
Smarcb1Q9Z0H3 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC22.52■■□□□ 1.2
Smarcb1Q9Z0H3 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC22.52■■□□□ 1.2
Smarcb1Q9Z0H3 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Smarcb1Q9Z0H3 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
Smarcb1Q9Z0H3 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
Smarcb1Q9Z0H3 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Smarcb1Q9Z0H3 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
Smarcb1Q9Z0H3 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Smarcb1Q9Z0H3 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Smarcb1Q9Z0H3 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Smarcb1Q9Z0H3 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
Smarcb1Q9Z0H3 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Smarcb1Q9Z0H3 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Smarcb1Q9Z0H3 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Smarcb1Q9Z0H3 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC22.5■■□□□ 1.19
Smarcb1Q9Z0H3 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Smarcb1Q9Z0H3 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
Smarcb1Q9Z0H3 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Smarcb1Q9Z0H3 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
Smarcb1Q9Z0H3 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC22.49■■□□□ 1.19
Smarcb1Q9Z0H3 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC22.48■■□□□ 1.19
Smarcb1Q9Z0H3 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Smarcb1Q9Z0H3 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC22.48■■□□□ 1.19
Smarcb1Q9Z0H3 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC22.48■■□□□ 1.19
Smarcb1Q9Z0H3 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Smarcb1Q9Z0H3 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Smarcb1Q9Z0H3 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC22.48■■□□□ 1.19
Smarcb1Q9Z0H3 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC22.47■■□□□ 1.19
Smarcb1Q9Z0H3 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC22.47■■□□□ 1.19
Smarcb1Q9Z0H3 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Smarcb1Q9Z0H3 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC22.47■■□□□ 1.19
Smarcb1Q9Z0H3 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Smarcb1Q9Z0H3 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC22.47■■□□□ 1.19
Smarcb1Q9Z0H3 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Smarcb1Q9Z0H3 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Smarcb1Q9Z0H3 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
Smarcb1Q9Z0H3 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC22.46■■□□□ 1.19
Smarcb1Q9Z0H3 Gm7417-201ENSMUST00000192950 473 ntBASIC22.46■■□□□ 1.19
Smarcb1Q9Z0H3 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Smarcb1Q9Z0H3 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC22.46■■□□□ 1.19
Smarcb1Q9Z0H3 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
Smarcb1Q9Z0H3 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC22.45■■□□□ 1.18
Smarcb1Q9Z0H3 Gm10399-202ENSMUST00000202768 748 ntBASIC22.45■■□□□ 1.18
Smarcb1Q9Z0H3 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC22.45■■□□□ 1.18
Smarcb1Q9Z0H3 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Smarcb1Q9Z0H3 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC22.45■■□□□ 1.18
Smarcb1Q9Z0H3 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
Smarcb1Q9Z0H3 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC22.44■■□□□ 1.18
Smarcb1Q9Z0H3 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC22.44■■□□□ 1.18
Smarcb1Q9Z0H3 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Smarcb1Q9Z0H3 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Smarcb1Q9Z0H3 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Smarcb1Q9Z0H3 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Smarcb1Q9Z0H3 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Smarcb1Q9Z0H3 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Smarcb1Q9Z0H3 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC22.43■■□□□ 1.18
Smarcb1Q9Z0H3 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC22.43■■□□□ 1.18
Smarcb1Q9Z0H3 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC22.43■■□□□ 1.18
Smarcb1Q9Z0H3 Gm40881-201ENSMUST00000223397 166 ntBASIC22.43■■□□□ 1.18
Smarcb1Q9Z0H3 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
Smarcb1Q9Z0H3 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC22.43■■□□□ 1.18
Smarcb1Q9Z0H3 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
Smarcb1Q9Z0H3 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Smarcb1Q9Z0H3 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC22.42■■□□□ 1.18
Smarcb1Q9Z0H3 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC22.42■■□□□ 1.18
Smarcb1Q9Z0H3 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
Smarcb1Q9Z0H3 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC22.42■■□□□ 1.18
Smarcb1Q9Z0H3 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC22.42■■□□□ 1.18
Smarcb1Q9Z0H3 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC22.42■■□□□ 1.18
Smarcb1Q9Z0H3 Gm8093-201ENSMUST00000128935 1892 ntBASIC22.42■■□□□ 1.18
Retrieved 100 of 76,532 protein–RNA pairs in 15.1 ms