Protein–RNA interactions for Protein: Q9WVL1

Ap4s1, AP-4 complex subunit sigma-1, mousemouse

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ap4s1Q9WVL1 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
Ap4s1Q9WVL1 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ap4s1Q9WVL1 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ap4s1Q9WVL1 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Ap4s1Q9WVL1 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ap4s1Q9WVL1 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ap4s1Q9WVL1 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ap4s1Q9WVL1 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
Ap4s1Q9WVL1 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ap4s1Q9WVL1 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
Ap4s1Q9WVL1 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Ap4s1Q9WVL1 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ap4s1Q9WVL1 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ap4s1Q9WVL1 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ap4s1Q9WVL1 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ap4s1Q9WVL1 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Ap4s1Q9WVL1 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Ap4s1Q9WVL1 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ap4s1Q9WVL1 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ap4s1Q9WVL1 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ap4s1Q9WVL1 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ap4s1Q9WVL1 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Ap4s1Q9WVL1 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC20.65■□□□□ 0.9
Ap4s1Q9WVL1 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Ap4s1Q9WVL1 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Ap4s1Q9WVL1 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ap4s1Q9WVL1 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Ap4s1Q9WVL1 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Ap4s1Q9WVL1 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Ap4s1Q9WVL1 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
Ap4s1Q9WVL1 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ap4s1Q9WVL1 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Ap4s1Q9WVL1 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC20.62■□□□□ 0.89
Ap4s1Q9WVL1 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
Ap4s1Q9WVL1 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC20.62■□□□□ 0.89
Ap4s1Q9WVL1 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ap4s1Q9WVL1 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ap4s1Q9WVL1 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ap4s1Q9WVL1 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ap4s1Q9WVL1 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ap4s1Q9WVL1 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ap4s1Q9WVL1 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ap4s1Q9WVL1 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ap4s1Q9WVL1 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ap4s1Q9WVL1 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Ap4s1Q9WVL1 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ap4s1Q9WVL1 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ap4s1Q9WVL1 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ap4s1Q9WVL1 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
Ap4s1Q9WVL1 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC20.6■□□□□ 0.89
Ap4s1Q9WVL1 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ap4s1Q9WVL1 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ap4s1Q9WVL1 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
Ap4s1Q9WVL1 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ap4s1Q9WVL1 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
Ap4s1Q9WVL1 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
Ap4s1Q9WVL1 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ap4s1Q9WVL1 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ap4s1Q9WVL1 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Ap4s1Q9WVL1 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Ap4s1Q9WVL1 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
Ap4s1Q9WVL1 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
Ap4s1Q9WVL1 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Ap4s1Q9WVL1 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Ap4s1Q9WVL1 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ap4s1Q9WVL1 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Ap4s1Q9WVL1 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ap4s1Q9WVL1 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ap4s1Q9WVL1 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC20.57■□□□□ 0.88
Ap4s1Q9WVL1 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ap4s1Q9WVL1 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ap4s1Q9WVL1 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ap4s1Q9WVL1 Gm42418-201ENSMUST00000182010 1831 ntBASIC20.56■□□□□ 0.88
Ap4s1Q9WVL1 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
Ap4s1Q9WVL1 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC20.56■□□□□ 0.88
Ap4s1Q9WVL1 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ap4s1Q9WVL1 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ap4s1Q9WVL1 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ap4s1Q9WVL1 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC20.55■□□□□ 0.88
Ap4s1Q9WVL1 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC20.55■□□□□ 0.88
Ap4s1Q9WVL1 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Ap4s1Q9WVL1 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Ap4s1Q9WVL1 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ap4s1Q9WVL1 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ap4s1Q9WVL1 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ap4s1Q9WVL1 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ap4s1Q9WVL1 Gm7199-201ENSMUST00000118327 1485 ntBASIC20.54■□□□□ 0.88
Ap4s1Q9WVL1 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
Ap4s1Q9WVL1 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ap4s1Q9WVL1 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
Ap4s1Q9WVL1 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Ap4s1Q9WVL1 Gm42809-201ENSMUST00000198429 1138 ntBASIC20.53■□□□□ 0.88
Ap4s1Q9WVL1 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ap4s1Q9WVL1 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ap4s1Q9WVL1 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Ap4s1Q9WVL1 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Ap4s1Q9WVL1 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Ap4s1Q9WVL1 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Ap4s1Q9WVL1 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ap4s1Q9WVL1 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC20.51■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 64.7 ms