Protein–RNA interactions for Protein: Q9R0X5

Rpgr, X-linked retinitis pigmentosa GTPase regulator, mousemouse

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RpgrQ9R0X5 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC21.72■■□□□ 1.07
RpgrQ9R0X5 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
RpgrQ9R0X5 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
RpgrQ9R0X5 AC117769.4-201ENSMUST00000225679 685 ntBASIC21.71■■□□□ 1.07
RpgrQ9R0X5 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
RpgrQ9R0X5 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC21.71■■□□□ 1.07
RpgrQ9R0X5 AC164433.2-201ENSMUST00000226346 1701 ntBASIC21.71■■□□□ 1.07
RpgrQ9R0X5 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
RpgrQ9R0X5 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.06
RpgrQ9R0X5 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
RpgrQ9R0X5 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC21.7■■□□□ 1.06
RpgrQ9R0X5 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
RpgrQ9R0X5 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC21.7■■□□□ 1.06
RpgrQ9R0X5 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC21.69■■□□□ 1.06
RpgrQ9R0X5 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
RpgrQ9R0X5 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC21.69■■□□□ 1.06
RpgrQ9R0X5 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC21.69■■□□□ 1.06
RpgrQ9R0X5 Notumos-201ENSMUST00000151998 2659 ntBASIC21.68■■□□□ 1.06
RpgrQ9R0X5 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
RpgrQ9R0X5 Gm7199-201ENSMUST00000118327 1485 ntBASIC21.68■■□□□ 1.06
RpgrQ9R0X5 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
RpgrQ9R0X5 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
RpgrQ9R0X5 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC21.68■■□□□ 1.06
RpgrQ9R0X5 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
RpgrQ9R0X5 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
RpgrQ9R0X5 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
RpgrQ9R0X5 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
RpgrQ9R0X5 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC21.67■■□□□ 1.06
RpgrQ9R0X5 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
RpgrQ9R0X5 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC21.66■■□□□ 1.06
RpgrQ9R0X5 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
RpgrQ9R0X5 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC21.66■■□□□ 1.06
RpgrQ9R0X5 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
RpgrQ9R0X5 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC21.65■■□□□ 1.06
RpgrQ9R0X5 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC21.65■■□□□ 1.06
RpgrQ9R0X5 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC21.65■■□□□ 1.06
RpgrQ9R0X5 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
RpgrQ9R0X5 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
RpgrQ9R0X5 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
RpgrQ9R0X5 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
RpgrQ9R0X5 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
RpgrQ9R0X5 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
RpgrQ9R0X5 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
RpgrQ9R0X5 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.06
RpgrQ9R0X5 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
RpgrQ9R0X5 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC21.64■■□□□ 1.05
RpgrQ9R0X5 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.05
RpgrQ9R0X5 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
RpgrQ9R0X5 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
RpgrQ9R0X5 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
RpgrQ9R0X5 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
RpgrQ9R0X5 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
RpgrQ9R0X5 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC21.63■■□□□ 1.05
RpgrQ9R0X5 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
RpgrQ9R0X5 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
RpgrQ9R0X5 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC21.63■■□□□ 1.05
RpgrQ9R0X5 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
RpgrQ9R0X5 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC21.63■■□□□ 1.05
RpgrQ9R0X5 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
RpgrQ9R0X5 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
RpgrQ9R0X5 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
RpgrQ9R0X5 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC21.63■■□□□ 1.05
RpgrQ9R0X5 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
RpgrQ9R0X5 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC21.62■■□□□ 1.05
RpgrQ9R0X5 Gm14523-201ENSMUST00000117260 558 ntBASIC21.62■■□□□ 1.05
RpgrQ9R0X5 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
RpgrQ9R0X5 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
RpgrQ9R0X5 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
RpgrQ9R0X5 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
RpgrQ9R0X5 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
RpgrQ9R0X5 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
RpgrQ9R0X5 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
RpgrQ9R0X5 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
RpgrQ9R0X5 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
RpgrQ9R0X5 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
RpgrQ9R0X5 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
RpgrQ9R0X5 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
RpgrQ9R0X5 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC21.6■■□□□ 1.05
RpgrQ9R0X5 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
RpgrQ9R0X5 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
RpgrQ9R0X5 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
RpgrQ9R0X5 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
RpgrQ9R0X5 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
RpgrQ9R0X5 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
RpgrQ9R0X5 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
RpgrQ9R0X5 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC21.59■■□□□ 1.05
RpgrQ9R0X5 Gm7332-201ENSMUST00000118351 454 ntBASIC21.59■■□□□ 1.05
RpgrQ9R0X5 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
RpgrQ9R0X5 Gm12366-201ENSMUST00000121722 873 ntBASIC21.59■■□□□ 1.05
RpgrQ9R0X5 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC21.59■■□□□ 1.05
RpgrQ9R0X5 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
RpgrQ9R0X5 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC21.59■■□□□ 1.05
RpgrQ9R0X5 Gm5786-201ENSMUST00000085368 882 ntBASIC21.59■■□□□ 1.05
RpgrQ9R0X5 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC21.59■■□□□ 1.05
RpgrQ9R0X5 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
RpgrQ9R0X5 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
RpgrQ9R0X5 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
RpgrQ9R0X5 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
RpgrQ9R0X5 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
RpgrQ9R0X5 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms