Protein–RNA interactions for Protein: Q9QZM3

Clcf1, Cardiotrophin-like cytokine factor 1, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcf1Q9QZM3 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Clcf1Q9QZM3 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Clcf1Q9QZM3 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC19.49■□□□□ 0.71
Clcf1Q9QZM3 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Clcf1Q9QZM3 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC19.49■□□□□ 0.71
Clcf1Q9QZM3 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Clcf1Q9QZM3 Gm45444-201ENSMUST00000211394 898 ntBASIC19.49■□□□□ 0.71
Clcf1Q9QZM3 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC19.49■□□□□ 0.71
Clcf1Q9QZM3 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Clcf1Q9QZM3 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC19.48■□□□□ 0.71
Clcf1Q9QZM3 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC19.48■□□□□ 0.71
Clcf1Q9QZM3 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Clcf1Q9QZM3 Gm43566-201ENSMUST00000196851 808 ntBASIC19.48■□□□□ 0.71
Clcf1Q9QZM3 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC19.48■□□□□ 0.71
Clcf1Q9QZM3 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
Clcf1Q9QZM3 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Clcf1Q9QZM3 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Clcf1Q9QZM3 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Clcf1Q9QZM3 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Clcf1Q9QZM3 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
Clcf1Q9QZM3 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Clcf1Q9QZM3 Gm13238-201ENSMUST00000117655 780 ntBASIC19.47■□□□□ 0.71
Clcf1Q9QZM3 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
Clcf1Q9QZM3 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC19.46■□□□□ 0.71
Clcf1Q9QZM3 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Clcf1Q9QZM3 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC19.46■□□□□ 0.71
Clcf1Q9QZM3 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Clcf1Q9QZM3 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Clcf1Q9QZM3 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
Clcf1Q9QZM3 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
Clcf1Q9QZM3 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Clcf1Q9QZM3 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Clcf1Q9QZM3 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Clcf1Q9QZM3 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Clcf1Q9QZM3 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Clcf1Q9QZM3 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
Clcf1Q9QZM3 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Clcf1Q9QZM3 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC19.45■□□□□ 0.7
Clcf1Q9QZM3 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
Clcf1Q9QZM3 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Clcf1Q9QZM3 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Clcf1Q9QZM3 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Clcf1Q9QZM3 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Clcf1Q9QZM3 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Clcf1Q9QZM3 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Clcf1Q9QZM3 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Clcf1Q9QZM3 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC19.44■□□□□ 0.7
Clcf1Q9QZM3 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC19.44■□□□□ 0.7
Clcf1Q9QZM3 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Clcf1Q9QZM3 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Clcf1Q9QZM3 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Clcf1Q9QZM3 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
Clcf1Q9QZM3 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Clcf1Q9QZM3 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Clcf1Q9QZM3 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Clcf1Q9QZM3 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Clcf1Q9QZM3 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Clcf1Q9QZM3 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Clcf1Q9QZM3 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Clcf1Q9QZM3 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Clcf1Q9QZM3 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC19.42■□□□□ 0.7
Clcf1Q9QZM3 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
Clcf1Q9QZM3 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Clcf1Q9QZM3 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Clcf1Q9QZM3 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Clcf1Q9QZM3 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Clcf1Q9QZM3 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Clcf1Q9QZM3 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Clcf1Q9QZM3 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC19.41■□□□□ 0.7
Clcf1Q9QZM3 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC19.41■□□□□ 0.7
Clcf1Q9QZM3 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Clcf1Q9QZM3 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Clcf1Q9QZM3 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Clcf1Q9QZM3 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Clcf1Q9QZM3 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Clcf1Q9QZM3 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Clcf1Q9QZM3 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC19.4■□□□□ 0.7
Clcf1Q9QZM3 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
Clcf1Q9QZM3 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Clcf1Q9QZM3 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Clcf1Q9QZM3 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Clcf1Q9QZM3 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Clcf1Q9QZM3 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Clcf1Q9QZM3 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Clcf1Q9QZM3 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC19.39■□□□□ 0.69
Clcf1Q9QZM3 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
Clcf1Q9QZM3 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Clcf1Q9QZM3 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Clcf1Q9QZM3 AC153524.1-201ENSMUST00000220436 1935 ntBASIC19.39■□□□□ 0.69
Clcf1Q9QZM3 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
Clcf1Q9QZM3 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC19.39■□□□□ 0.69
Clcf1Q9QZM3 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
Clcf1Q9QZM3 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Clcf1Q9QZM3 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Clcf1Q9QZM3 Gm15546-201ENSMUST00000122095 826 ntBASIC19.38■□□□□ 0.69
Clcf1Q9QZM3 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC19.38■□□□□ 0.69
Clcf1Q9QZM3 Gm5522-201ENSMUST00000189483 1242 ntBASIC19.38■□□□□ 0.69
Clcf1Q9QZM3 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Clcf1Q9QZM3 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
Clcf1Q9QZM3 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 83 ms