Protein–RNA interactions for Protein: Q9QXN0

Shroom3, Protein Shroom3, mousemouse

Predictions only

Length 1,986 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom3Q9QXN0 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Shroom3Q9QXN0 AC115037.1-201ENSMUST00000223391 2173 ntBASIC21.82■■□□□ 1.08
Shroom3Q9QXN0 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Shroom3Q9QXN0 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
Shroom3Q9QXN0 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Shroom3Q9QXN0 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Shroom3Q9QXN0 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Shroom3Q9QXN0 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Shroom3Q9QXN0 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Shroom3Q9QXN0 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Shroom3Q9QXN0 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Shroom3Q9QXN0 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Shroom3Q9QXN0 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC21.81■■□□□ 1.08
Shroom3Q9QXN0 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Shroom3Q9QXN0 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Shroom3Q9QXN0 Gm14117-201ENSMUST00000122417 843 ntBASIC21.8■■□□□ 1.08
Shroom3Q9QXN0 Gm15820-201ENSMUST00000201566 728 ntBASIC21.8■■□□□ 1.08
Shroom3Q9QXN0 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC21.8■■□□□ 1.08
Shroom3Q9QXN0 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Shroom3Q9QXN0 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC21.79■■□□□ 1.08
Shroom3Q9QXN0 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Shroom3Q9QXN0 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Shroom3Q9QXN0 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Shroom3Q9QXN0 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC21.79■■□□□ 1.08
Shroom3Q9QXN0 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Shroom3Q9QXN0 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Shroom3Q9QXN0 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Shroom3Q9QXN0 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Shroom3Q9QXN0 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC21.78■■□□□ 1.08
Shroom3Q9QXN0 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC21.78■■□□□ 1.08
Shroom3Q9QXN0 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Shroom3Q9QXN0 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
Shroom3Q9QXN0 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
Shroom3Q9QXN0 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
Shroom3Q9QXN0 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Shroom3Q9QXN0 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Shroom3Q9QXN0 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Shroom3Q9QXN0 Gm45444-201ENSMUST00000211394 898 ntBASIC21.77■■□□□ 1.08
Shroom3Q9QXN0 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Shroom3Q9QXN0 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Shroom3Q9QXN0 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Shroom3Q9QXN0 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC21.76■■□□□ 1.07
Shroom3Q9QXN0 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
Shroom3Q9QXN0 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Shroom3Q9QXN0 AC153962.1-201ENSMUST00000218530 1948 ntBASIC21.75■■□□□ 1.07
Shroom3Q9QXN0 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
Shroom3Q9QXN0 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Shroom3Q9QXN0 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC21.75■■□□□ 1.07
Shroom3Q9QXN0 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
Shroom3Q9QXN0 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
Shroom3Q9QXN0 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
Shroom3Q9QXN0 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC21.74■■□□□ 1.07
Shroom3Q9QXN0 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Shroom3Q9QXN0 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Shroom3Q9QXN0 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Shroom3Q9QXN0 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Shroom3Q9QXN0 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
Shroom3Q9QXN0 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC21.73■■□□□ 1.07
Shroom3Q9QXN0 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Shroom3Q9QXN0 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Shroom3Q9QXN0 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC21.72■■□□□ 1.07
Shroom3Q9QXN0 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Shroom3Q9QXN0 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
Shroom3Q9QXN0 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Shroom3Q9QXN0 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Shroom3Q9QXN0 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Shroom3Q9QXN0 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC21.71■■□□□ 1.07
Shroom3Q9QXN0 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Shroom3Q9QXN0 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Shroom3Q9QXN0 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Shroom3Q9QXN0 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC21.71■■□□□ 1.07
Shroom3Q9QXN0 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC21.71■■□□□ 1.07
Shroom3Q9QXN0 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Shroom3Q9QXN0 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC21.71■■□□□ 1.07
Shroom3Q9QXN0 Gm17641-201ENSMUST00000166328 2350 ntBASIC21.71■■□□□ 1.07
Shroom3Q9QXN0 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Shroom3Q9QXN0 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
Shroom3Q9QXN0 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
Shroom3Q9QXN0 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Shroom3Q9QXN0 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Shroom3Q9QXN0 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC21.7■■□□□ 1.06
Shroom3Q9QXN0 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
Shroom3Q9QXN0 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Shroom3Q9QXN0 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Shroom3Q9QXN0 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Shroom3Q9QXN0 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Shroom3Q9QXN0 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Shroom3Q9QXN0 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Shroom3Q9QXN0 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Shroom3Q9QXN0 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Shroom3Q9QXN0 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Shroom3Q9QXN0 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Shroom3Q9QXN0 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Shroom3Q9QXN0 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Shroom3Q9QXN0 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Shroom3Q9QXN0 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Shroom3Q9QXN0 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
Shroom3Q9QXN0 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Shroom3Q9QXN0 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Shroom3Q9QXN0 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC21.68■■□□□ 1.06
Retrieved 100 of 76,532 protein–RNA pairs in 38.3 ms